RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 SURF4O15260 269 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 TM9SF1O15321 606 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 RGS16O15492 202 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 PPIHO43447 177 aaKnown RBP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 SLC19A2O60779 497 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 RAMP3O60896 148 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 SRSF10O75494 262 aaKnown RBP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR2B3O76000 313 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 KRT34O76011 436 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 GNA14O95837 355 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 LY6G6DO95868 133 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 HLA-DQB2P05538 268 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 UQCRHP07919 91 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 ERCC1P07992 297 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 NPIPA8P0DM63 369 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 CD1EP15812 388 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 SRMP19623 302 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 GSTM3P21266 225 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 TEAD1P28347 426 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 PDHA2P29803 388 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 PRDX3P30048 256 aaKnown RBP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 MIPP30301 263 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 GPR183P32249 361 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 RPL4P36578 427 aaKnown RBP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR1D4P47884 311 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 RAB9AP51151 201 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 SLC7A2P52569 658 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 ARG2P78540 354 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 ZNF85Q03923 595 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 ZIC1Q15915 447 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 NKAIN1Q4KMZ8 207 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 TFDP3Q5H9I0 405 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 C6orf183Q5T699 404 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 DNAJC24Q6P3W2 148 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 DCUN1D2Q6PH85 259 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 XKRXQ6PP77 449 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 TSEN54Q7Z6J9 526 aaKnown RBP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 NT5DC3Q86UY8 548 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 OOSP2Q86WS3 158 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 SYCE1Q8N0S2 351 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 SPAG16Q8N0X2 631 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 RPRMLQ8N4K4 120 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 WFDC11Q8NEX6 87 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR4K14Q8NGD5 310 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR9Q2Q8NGE9 314 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR4D10Q8NGI6 311 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR6F1Q8NGZ6 308 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 GPX8Q8TED1 209 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 GLYATL2Q8WU03 294 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 ASZ1Q8WWH4 475 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 SDSLQ96GA7 329 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 MCCC1Q96RQ3 725 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 GAL3ST1Q99999 423 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 ANKRD60Q9BZ19 345 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 MRPL37Q9BZE1 423 aaKnown RBP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 FAM96AQ9H5X1 160 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 MTHFD2LQ9H903 347 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 UCK1Q9HA47 277 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 Q9HAA7 133 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 ADGRL4Q9HBW9 690 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 CCNB1IP1Q9NPC3 277 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 B3GAT2Q9NPZ5 323 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 PNO1Q9NRX1 252 aaKnown RBP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 RBM22Q9NW64 420 aaKnown RBP eCLIP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 NPIPA1Q9UND3 350 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 NOSIPQ9Y314 301 aaKnown RBP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 PPIL1Q9Y3C6 166 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 BZW2Q9Y6E2 419 aaKnown RBP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 HEATR5AQ86XA9 2040 aa2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 PHF3Q92576 2039 aaKnown RBP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 RAI1Q7Z5J4 1906 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P6-201ENST00000569046 FBN1P35555 2871 aaKnown RBP2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 KIAA1549Q9HCM3 1950 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 IGHV3-20A0A0C4DH32 117 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 A0A1W2PPV9 198 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 GOLGA6L4A6NEF3 574 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 SRRM5B3KS81 715 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 HSBP1L1C9JCN9 74 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 NPIPA5E9PKD4 350 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 F8VZ95 297 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 ZNF701M0R085 212 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 KCNK1O00180 336 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 CCL22O00626 93 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 MFSD11O43934 449 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 ATP5LO75964 103 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 OR2J3O76001 311 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 CLDN9O95484 217 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 LSM8O95777 96 aaKnown RBP2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 IGHG3P01860 377 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 P04436 131 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 H2BFMP0C1H6 154 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 UCHL3P15374 230 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 H2AFXP16104 143 aaPredicted RBP2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 ZNF30P17039 623 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 PRKACAP17612 351 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 PRKACBP22694 351 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 GCAP28676 217 aa2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 GTF2E2P29084 291 aaKnown RBP2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 RPL13AP40429 203 aaKnown RBP2.63□□□□□ -1.99
HMGB1P6-201ENST00000569046 RFC3P40938 356 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms