RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 HGFACQ04756 655 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 KRTAP27-1Q3LI81 207 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 KLHL22Q53GT1 634 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 KCTD18Q6PI47 426 aaPredicted RBP9.91□□□□□ -0.82
KARS-207ENST00000566560 LRRN1Q6UXK5 716 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 RFPL4BQ6ZWI9 263 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 AHSA2Q719I0 299 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 SSX6Q7RTT6 188 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 KRT77Q7Z794 578 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 BPIFB6Q8NFQ5 453 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 OR52I1Q8NGK6 324 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 AKAP1Q92667 903 aaKnown RBP eCLIP9.91□□□□□ -0.82
KARS-207ENST00000566560 ZNF799Q96GE5 643 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 OR8B4Q96RC9 309 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 DCLRE1CQ96SD1 692 aaKnown RBP9.91□□□□□ -0.82
KARS-207ENST00000566560 DOK1Q99704 481 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 MROQ9BYG7 248 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 EIF3KQ9UBQ5 218 aaKnown RBP9.91□□□□□ -0.82
KARS-207ENST00000566560 EXOGQ9Y2C4 368 aaKnown RBP9.91□□□□□ -0.82
KARS-207ENST00000566560 LRP12Q9Y561 859 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 AKAP6Q13023 2319 aa9.91□□□□□ -0.82
KARS-207ENST00000566560 UNC79Q9P2D8 2635 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 DAPL1A0PJW8 107 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 EFCAB10A6NFE3 127 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 J3QRE1 110 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 DENRO43583 198 aaKnown RBP9.9□□□□□ -0.82
KARS-207ENST00000566560 GPRIN2O60269 458 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 IGHA1P01876 353 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 KRT8P05787 483 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 ACSM4P0C7M7 580 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 PIPP12273 146 aaPredicted RBP9.9□□□□□ -0.82
KARS-207ENST00000566560 OTX1P32242 354 aaPredicted RBP9.9□□□□□ -0.82
KARS-207ENST00000566560 CX3CR1P49238 355 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 PRKXP51817 358 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 TPTEP56180 551 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 RPS23P62266 143 aaKnown RBP9.9□□□□□ -0.82
KARS-207ENST00000566560 NKX6-1P78426 367 aaPredicted RBP9.9□□□□□ -0.82
KARS-207ENST00000566560 ROM1Q03395 351 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 ZNF85Q03923 595 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 EGR3Q06889 387 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 ZNF672Q499Z4 452 aaPredicted RBP9.9□□□□□ -0.82
KARS-207ENST00000566560 C6orf141Q5SZD1 244 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 VHLLQ6RSH7 139 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 ARL9Q6T311 187 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 UNQ6126/PRO20091Q6UXV3 157 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 RHOUQ7L0Q8 258 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 FAM220AQ7Z4H9 259 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.9□□□□□ -0.82
KARS-207ENST00000566560 ZNF101Q8IZC7 436 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 ZNF786Q8N393 782 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 ACBD7Q8N6N7 88 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 ZNF283Q8N7M2 679 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 NUP37Q8NFH4 326 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 ABHD4Q8TB40 342 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 IPCEF1Q8WWN9 437 aaPredicted RBP9.9□□□□□ -0.82
KARS-207ENST00000566560 NEUROG1Q92886 237 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 C4orf45Q96LM5 186 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 KCNJ15Q99712 375 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 UBTD1Q9HAC8 227 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 ELOVL3Q9HB03 270 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 INPP5EQ9NRR6 644 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 CA10Q9NS85 328 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 MRPS18AQ9NVS2 196 aaKnown RBP9.9□□□□□ -0.82
KARS-207ENST00000566560 SLCO1C1Q9NYB5 712 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 CNOT2Q9NZN8 540 aaKnown RBP9.9□□□□□ -0.82
KARS-207ENST00000566560 MYRFQ9Y2G1 1151 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 GRIP1Q9Y3R0 1128 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 SPEF1Q9Y4P9 236 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 ABCA12Q86UK0 2595 aa9.9□□□□□ -0.82
KARS-207ENST00000566560 HS3ST1O14792 307 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 WIPF1O43516 503 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 LCKP06239 509 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 ANXA2P07355 339 aaKnown RBP9.89□□□□□ -0.83
KARS-207ENST00000566560 MYL12AP19105 171 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 NR4A1P22736 598 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 PCSK6P29122 969 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 RAD52P43351 418 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 RGS6P49758 472 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 RIDAP52758 137 aaKnown RBP9.89□□□□□ -0.83
KARS-207ENST00000566560 ERVS71-1P61550 626 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 ACTA2P62736 377 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 ACTG2P63267 376 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 MED21Q13503 144 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 ZNF829Q3KNS6 432 aaPredicted RBP9.89□□□□□ -0.83
KARS-207ENST00000566560 DEGS2Q6QHC5 323 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 DRAM2Q6UX65 266 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 PLEKHG7Q6ZR37 379 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 ZNF679Q8IYX0 411 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 ZNF540Q8NDQ6 660 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 SNX33Q8WV41 574 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 FBXW5Q969U6 566 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 APOBEC3DQ96AK3 386 aaPredicted RBP9.89□□□□□ -0.83
KARS-207ENST00000566560 MRPL48Q96GC5 212 aaKnown RBP9.89□□□□□ -0.83
KARS-207ENST00000566560 ALG8Q9BVK2 526 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 BCL2L14Q9BZR8 327 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 ZNF442Q9H7R0 627 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 NIPAL2Q9H841 368 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 FGF20Q9NP95 211 aaPredicted RBP9.89□□□□□ -0.83
KARS-207ENST00000566560 PLCXD1Q9NUJ7 323 aa9.89□□□□□ -0.83
KARS-207ENST00000566560 SCN3BQ9NY72 215 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms