RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 FAM198BQ6UWH4 519 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 C8orf86Q6ZUL3 223 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 LINGO2Q7L985 606 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 GLCCI1Q86VQ1 547 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 TMPRSS12Q86WS5 348 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 PLCZ1Q86YW0 608 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 UEVLDQ8IX04 471 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 DTX3Q8N9I9 347 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 WDSUB1Q8N9V3 476 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 OR4K17Q8NGC6 315 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 OR56B4Q8NH76 319 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 ST7LQ8TDW4 575 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 RNF133Q8WVZ7 376 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 TSEN15Q8WW01 171 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 ITFG2Q969R8 447 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 NTNG2Q96CW9 530 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 SLC25A44Q96H78 314 aaPredicted RBP6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 OXGR1Q96P68 337 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 OR2M2Q96R28 347 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 DIABLOQ9NR28 239 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 EMC3Q9P0I2 261 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 B3GAT1Q9P2W7 334 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 ING1Q9UK53 422 aaPredicted RBP6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 HHLA2Q9UM44 414 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 DHDHQ9UQ10 334 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 PTRH2Q9Y3E5 179 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 KIF26BQ2KJY2 2108 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 TRAV8-7A0A075B6U6 113 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 A0A087WV48 116 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 SLC17A2O00624 439 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 EIF4EBP3O60516 100 aaPredicted RBP6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 IGHG1P01857 330 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 C1QBP02746 253 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 UMODP07911 640 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 UBCP0CG48 685 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 COX6A1P12074 109 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 NR2C1P13056 603 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 CCL4P13236 92 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 ICAM2P13598 275 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 ACHEP22303 614 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 GIFP27352 417 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 LAP3P28838 519 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 P2RY4P51582 365 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 NKX2-5P52952 324 aaPredicted RBP6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 BIDP55957 195 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 CD83Q01151 205 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 IFITM2Q01629 132 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 ELFN2Q5R3F8 820 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 OR7E24Q6IFN5 339 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 FAM166AQ6J272 317 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 ANKRD16Q6P6B7 361 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 PRSS45Q7RTY3 260 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 DCXRQ7Z4W1 244 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 FAM90A1Q86YD7 464 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 GTPBP8Q8N3Z3 284 aaPredicted RBP6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 OR51A4Q8NGJ6 313 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 OR10AC1Q8NH08 325 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 OR6X1Q8NH79 312 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 CAPSLQ8WWF8 208 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 FYTTD1Q96QD9 318 aaKnown RBP6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 ZPBPQ9BS86 351 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 ANGPTL4Q9BY76 406 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 ULBP3Q9BZM4 244 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 NUDT15Q9NV35 164 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 MED29Q9NX70 200 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 TAS2R8Q9NYW2 309 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 SLC22A13Q9Y226 551 aa6.45□□□□□ -1.38
HERPUD1-209ENST00000564678 A0A0A6YYJ9 748 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 TMEM269A0A1B0GVZ9 245 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 ANKRD20A5PA0PJZ0 165 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 TLX3O43711 291 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 PRAF2O60831 178 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 GLSO94925 669 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 VAMP5O95183 116 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 ZNF205O95201 554 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 MPZL1O95297 269 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 PMS2P2O95744 297 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 ADRB1P08588 477 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 H2BFMP0C1H6 154 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 H2AFB2P0C5Z0 115 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 IGFBP3P17936 291 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 CDK2P24941 298 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 GZMKP49863 264 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 DSCR4P56555 118 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 CLDN12P56749 244 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 SLC35A1P78382 337 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 SSBP1Q04837 148 aaKnown RBP6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 CDK10Q15131 360 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 CD276Q5ZPR3 534 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 TMEM225Q6GV28 225 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 TMPPEQ6ZT21 453 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 NDUFAF7Q7L592 441 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 OR52I2Q8NH67 350 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 PAQR8Q8TEZ7 354 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 ATOH1Q92858 354 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 RNF170Q96K19 258 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 FER1L6-AS2Q96M78 137 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 ATP6V0BQ99437 205 aa6.44□□□□□ -1.38
HERPUD1-209ENST00000564678 GTPBP2Q9BX10 602 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms