RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 HEXBP07686 556 aa12.02□□□□□ -0.49
CLK3-215ENST00000564353 AKR1C4P17516 323 aa12.02□□□□□ -0.49
CLK3-215ENST00000564353 PI3P19957 117 aa12.02□□□□□ -0.49
CLK3-215ENST00000564353 VAMP1P23763 118 aa12.02□□□□□ -0.49
CLK3-215ENST00000564353 GALNSP34059 522 aa12.02□□□□□ -0.49
CLK3-215ENST00000564353 CXADRP78310 365 aa12.02□□□□□ -0.49
CLK3-215ENST00000564353 ATPAF1Q5TC12 328 aaPredicted RBP12.02□□□□□ -0.49
CLK3-215ENST00000564353 PTCRAQ6ISU1 281 aaPredicted RBP12.02□□□□□ -0.49
CLK3-215ENST00000564353 GSG1LQ6UXU4 331 aa12.02□□□□□ -0.49
CLK3-215ENST00000564353 TRAPPC6BQ86SZ2 158 aa12.02□□□□□ -0.49
CLK3-215ENST00000564353 FJX1Q86VR8 437 aa12.02□□□□□ -0.49
CLK3-215ENST00000564353 ST7LQ8TDW4 575 aa12.02□□□□□ -0.49
CLK3-215ENST00000564353 ZNF775Q96BV0 537 aaPredicted RBP12.02□□□□□ -0.49
CLK3-215ENST00000564353 FAM71F1Q96KD3 344 aaPredicted RBP12.02□□□□□ -0.49
CLK3-215ENST00000564353 RBM14Q96PK6 669 aaKnown RBP12.02□□□□□ -0.49
CLK3-215ENST00000564353 MRI1Q9BV20 369 aa12.02□□□□□ -0.49
CLK3-215ENST00000564353 BANF2Q9H503 90 aa12.02□□□□□ -0.49
CLK3-215ENST00000564353 hCG_1807616A0A1W2PRN6 198 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 ADAM10O14672 748 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 MFSD13AQ14CX5 517 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 FAM166AQ6J272 317 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 ADGRE4PQ86SQ3 457 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 ASB10Q8WXI3 467 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 SELENOIQ9C0D9 397 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 C5orf63A6NC05 138 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 OR2J2O76002 312 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 PMP2P02689 132 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 DCNP07585 359 aaKnown RBP12.01□□□□□ -0.49
CLK3-215ENST00000564353 CELA2AP08217 269 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 CRABP1P29762 137 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 DCAF7P61962 342 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 ROM1Q03395 351 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 LY6G6FQ5SQ64 297 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 ZNF574Q6ZN55 896 aaPredicted RBP12.01□□□□□ -0.49
CLK3-215ENST00000564353 H1FNTQ75WM6 255 aaPredicted RBP12.01□□□□□ -0.49
CLK3-215ENST00000564353 C17orf82Q86X59 251 aaPredicted RBP12.01□□□□□ -0.49
CLK3-215ENST00000564353 D2HGDHQ8N465 521 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 C12orf45Q8N5I9 185 aaPredicted RBP12.01□□□□□ -0.49
CLK3-215ENST00000564353 MAFIPQ8WZ33 124 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 ST8SIA4Q92187 359 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 SLAMF6Q96DU3 332 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 ZNF75AQ96N20 296 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 WDR13Q9H1Z4 485 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 VSIG4Q9Y279 399 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 KCNMB2Q9Y691 235 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 TRAV14DV4A0A0A6YYC5 116 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 SYT7O43581 403 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 TAS2R19P59542 299 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 DHRS2Q13268 280 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 UNC119Q13432 240 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 PAPD4Q6PIY7 484 aaKnown RBP12.01□□□□□ -0.49
CLK3-215ENST00000564353 ZNF584Q8IVC4 421 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 ZNF101Q8IZC7 436 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 BEST3Q8N1M1 668 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 OR10H5Q8NGA6 315 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 OR13C8Q8NGS7 320 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 C12orf57Q99622 126 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 TAS2R8Q9NYW2 309 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 AUP1Q9Y679 476 aa12.01□□□□□ -0.49
CLK3-215ENST00000564353 EEF1E1-BLOC1S5C9J1V9 151 aa12□□□□□ -0.49
CLK3-215ENST00000564353 RER1O15258 196 aa12□□□□□ -0.49
CLK3-215ENST00000564353 MBTPS2O43462 519 aa12□□□□□ -0.49
CLK3-215ENST00000564353 S100A6P06703 90 aa12□□□□□ -0.49
CLK3-215ENST00000564353 SRFP11831 508 aa12□□□□□ -0.49
CLK3-215ENST00000564353 HRH1P35367 487 aa12□□□□□ -0.49
CLK3-215ENST00000564353 MYBPHQ13203 477 aa12□□□□□ -0.49
CLK3-215ENST00000564353 TDGQ13569 410 aa12□□□□□ -0.49
CLK3-215ENST00000564353 DNM1P46Q6ZS02 220 aa12□□□□□ -0.49
CLK3-215ENST00000564353 ZNF546Q86UE3 836 aa12□□□□□ -0.49
CLK3-215ENST00000564353 NAA40Q86UY6 237 aa12□□□□□ -0.49
CLK3-215ENST00000564353 ZNF441Q8N8Z8 693 aa12□□□□□ -0.49
CLK3-215ENST00000564353 ADAD2Q8NCV1 583 aaKnown RBP12□□□□□ -0.49
CLK3-215ENST00000564353 OR10S1Q8NGN2 331 aa12□□□□□ -0.49
CLK3-215ENST00000564353 WBP1Q96G27 269 aa12□□□□□ -0.49
CLK3-215ENST00000564353 OR5B2Q96R09 309 aa12□□□□□ -0.49
CLK3-215ENST00000564353 KLHL13Q9P2N7 655 aa12□□□□□ -0.49
CLK3-215ENST00000564353 GDF2Q9UK05 429 aaPredicted RBP12□□□□□ -0.49
CLK3-215ENST00000564353 A0A1W2PQD3 144 aa12□□□□□ -0.49
CLK3-215ENST00000564353 PRSS44E7EML9 344 aa12□□□□□ -0.49
CLK3-215ENST00000564353 OR2T1O43869 369 aa12□□□□□ -0.49
CLK3-215ENST00000564353 SSX5O60225 188 aa12□□□□□ -0.49
CLK3-215ENST00000564353 TTRP02766 147 aa12□□□□□ -0.49
CLK3-215ENST00000564353 HOXB1P14653 301 aaPredicted RBP12□□□□□ -0.49
CLK3-215ENST00000564353 GABRA1P14867 456 aa12□□□□□ -0.49
CLK3-215ENST00000564353 IGFBP3P17936 291 aaPredicted RBP12□□□□□ -0.49
CLK3-215ENST00000564353 ACTBP60709 375 aa12□□□□□ -0.49
CLK3-215ENST00000564353 ACTG1P63261 375 aa12□□□□□ -0.49
CLK3-215ENST00000564353 ZNF660Q6AZW8 331 aaPredicted RBP12□□□□□ -0.49
CLK3-215ENST00000564353 GUSBP11Q6P575 273 aa12□□□□□ -0.49
CLK3-215ENST00000564353 PAQR4Q8N4S7 273 aaPredicted RBP12□□□□□ -0.49
CLK3-215ENST00000564353 TMEM104Q8NE00 496 aa12□□□□□ -0.49
CLK3-215ENST00000564353 OR6M1Q8NGM8 313 aa12□□□□□ -0.49
CLK3-215ENST00000564353 C15orf40Q8WUR7 153 aa12□□□□□ -0.49
CLK3-215ENST00000564353 PPP4R1LQ9P1A2 415 aa12□□□□□ -0.49
CLK3-215ENST00000564353 ZNF319Q9P2F9 582 aa12□□□□□ -0.49
CLK3-215ENST00000564353 ASH2LQ9UBL3 628 aa12□□□□□ -0.49
CLK3-215ENST00000564353 GPR160Q9UJ42 338 aa12□□□□□ -0.49
CLK3-215ENST00000564353 COL4A2P08572 1712 aa12□□□□□ -0.49
CLK3-215ENST00000564353 ASPMQ8IZT6 3477 aa11.99□□□□□ -0.49
CLK3-215ENST00000564353 IGHV3-15A0A0B4J1V0 119 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms