RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 COQ7Q99807 217 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 HCAR1Q9BXC0 346 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 MS4A7Q9GZW8 240 aaPredicted RBP13.06□□□□□ -0.32
TPM1-211ENST00000558314 HDHD2Q9H0R4 259 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 OR52D1Q9H346 318 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 NTN4Q9HB63 628 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 ABCD2Q9UBJ2 740 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 B9D1Q9UPM9 204 aa13.06□□□□□ -0.32
TPM1-211ENST00000558314 SPRY1O43609 319 aaPredicted RBP13.05□□□□□ -0.32
TPM1-211ENST00000558314 LCATP04180 440 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 HIST1H1CP16403 213 aaKnown RBP13.05□□□□□ -0.32
TPM1-211ENST00000558314 ZNF12P17014 697 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 FPR3P25089 353 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 SMIM11AP58511 58 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 BAMBIQ13145 260 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 RFX4Q33E94 735 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 AWAT1Q58HT5 328 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 FBXW12Q6X9E4 464 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 OR6V1Q8N148 313 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 BOLLQ8N9W6 283 aaKnown RBP13.05□□□□□ -0.32
TPM1-211ENST00000558314 C19orf18Q8NEA5 215 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 SDR9C7Q8NEX9 313 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 DVL3Q92997 716 aaPredicted RBP13.05□□□□□ -0.32
TPM1-211ENST00000558314 PYURFQ96I23 114 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 TMEM100Q9NV29 134 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 TMCC3Q9ULS5 477 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 PCDHGB1Q9Y5G3 927 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 N6AMT1Q9Y5N5 214 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 INSIG2Q9Y5U4 225 aa13.05□□□□□ -0.32
TPM1-211ENST00000558314 IGLV1-36A0A0B4J1U3 117 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 LRRC30A6NM36 301 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 TXNDC12O95881 172 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 FSHBP01225 129 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 IRF2P14316 349 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 COMPP49747 757 aaPredicted RBP13.04□□□□□ -0.32
TPM1-211ENST00000558314 GNB2P62879 340 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 KCNMB1Q16558 191 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 SLC36A3Q495N2 470 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 KLF17Q5JT82 389 aaPredicted RBP13.04□□□□□ -0.32
TPM1-211ENST00000558314 CLEC12AQ5QGZ9 265 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 PGM2L1Q6PCE3 622 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 BTNL3Q6UXE8 466 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 CFAP77Q6ZQR2 320 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 OR52E2Q8NGJ4 325 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 SLCO4A1Q96BD0 722 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 ZMYND19Q96E35 227 aaPredicted RBP13.04□□□□□ -0.32
TPM1-211ENST00000558314 SSBP3Q9BWW4 388 aaPredicted RBP13.04□□□□□ -0.32
TPM1-211ENST00000558314 MED4Q9NPJ6 270 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 UFSP2Q9NUQ7 469 aa13.04□□□□□ -0.32
TPM1-211ENST00000558314 PPIAL4EA0A075B759 164 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 PPIAL4CA0A0B4J2A2 164 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 DNAJC9-AS1A6NH13 148 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 PPIAL4DF5H284 164 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 MLNRO43193 412 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 FABP3P05413 133 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 PPIAL4FP0DN26 164 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 RRM2P31350 389 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 PYCR1P32322 319 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 MXRA7P84157 204 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 MALLQ13021 153 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 PRAMEF6Q5VXH4 476 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 CPLX4Q7Z7G2 160 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 NAA40Q86UY6 237 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 KLBQ86Z14 1044 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 LNX2Q8N448 690 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 SPRYD4Q8WW59 207 aaPredicted RBP13.03□□□□□ -0.32
TPM1-211ENST00000558314 NSMCE2Q96MF7 247 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 ATF6BQ99941 703 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 TMEM246Q9BRR3 403 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 MYLK2Q9H1R3 596 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 TMEM165Q9HC07 324 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 ATPIF1Q9UII2 106 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 MAGEL2Q9UJ55 1249 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 LRCH1Q9Y2L9 728 aa13.03□□□□□ -0.32
TPM1-211ENST00000558314 SOX21Q9Y651 276 aaPredicted RBP13.03□□□□□ -0.32
TPM1-211ENST00000558314 TENM1Q9UKZ4 2725 aa13.02□□□□□ -0.32
TPM1-211ENST00000558314 TVP23AA6NH52 213 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 IQCF6A8MYZ5 107 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 F5H0A9 414 aaPredicted RBP13.02□□□□□ -0.33
TPM1-211ENST00000558314 J3QW42 95 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 IFNL4K9M1U5 179 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 WNT2P09544 360 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 ACSM4P0C7M7 580 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 IGHV4-38-2P0DP08 117 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 ZNF823P16415 610 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 EGR1P18146 543 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 PRDX6P30041 224 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 CD80P33681 288 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 IFNGR2P38484 337 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 RPS27P42677 84 aaKnown RBP13.02□□□□□ -0.33
TPM1-211ENST00000558314 RAD23AP54725 363 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.02□□□□□ -0.33
TPM1-211ENST00000558314 COX10Q12887 443 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 TRAP1Q12931 704 aaKnown RBP13.02□□□□□ -0.33
TPM1-211ENST00000558314 SLC18B1Q6NT16 456 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 MRPL21Q7Z2W9 205 aaKnown RBP13.02□□□□□ -0.33
TPM1-211ENST00000558314 C1orf87Q8N0U7 546 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 PARP8Q8N3A8 854 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 CYB561A3Q8NBI2 242 aa13.02□□□□□ -0.33
TPM1-211ENST00000558314 SLC26A10Q8NG04 563 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms