RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 OR10G3Q8NGC4 313 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 OR51A4Q8NGJ6 313 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 OR2Y1Q8NGV0 311 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 OR2T35Q8NGX2 323 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 OR10AC1Q8NH08 325 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 POC1BQ8TC44 478 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 PIGKQ92643 395 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 SNAPC3Q92966 411 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 FAHD2AQ96GK7 314 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 IMMP1LQ96LU5 166 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 PRRT1Q99946 306 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 SF3B5Q9BWJ5 86 aaKnown RBP7.4□□□□□ -1.22
SPG11-209ENST00000558253 PBOV1Q9GZY1 135 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 CENPMQ9NSP4 180 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 FAM206AQ9NX38 181 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 SLC2A8Q9NY64 477 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 NKIRAS2Q9NYR9 191 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 TAS2R4Q9NYW5 299 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 B3GAT1Q9P2W7 334 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 FBXO9Q9UK97 447 aaPredicted RBP7.4□□□□□ -1.22
SPG11-209ENST00000558253 VDAC3Q9Y277 283 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 MRPS18CQ9Y3D5 142 aaKnown RBP7.4□□□□□ -1.22
SPG11-209ENST00000558253 U3KQ87 197 aa7.4□□□□□ -1.22
SPG11-209ENST00000558253 HEATR5AQ86XA9 2040 aa7.4□□□□□ -1.23
SPG11-209ENST00000558253 LOC100996750A0A140TA64 210 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 LINC00862A6NCI5 91 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 LINC01387J3KSC0 135 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 SULT2B1O00204 365 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 TRAF3IP2O43734 574 aaPredicted RBP7.39□□□□□ -1.23
SPG11-209ENST00000558253 EFNA2O43921 213 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 ZNF354AO60765 605 aaPredicted RBP7.39□□□□□ -1.23
SPG11-209ENST00000558253 CBR3O75828 277 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 MPZL1O95297 269 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 RAB3DO95716 219 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 GPANK1O95872 356 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 HPXP02790 462 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 ITGB2P05107 769 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 CFIP05156 583 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 ACSM4P0C7M7 580 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 ZNF20P17024 532 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 CXCL3P19876 107 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 CCL1P22362 96 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 GNALP38405 381 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 RPS27P42677 84 aaKnown RBP7.39□□□□□ -1.23
SPG11-209ENST00000558253 CBX5P45973 191 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 FGL1Q08830 312 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 LINC00303Q3SY05 128 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 ACTBL2Q562R1 376 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 C10orf128Q5T292 105 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 RTL6Q6ICC9 239 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 OR5M10Q6IEU7 315 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 ZNF813Q6ZN06 617 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 FOXL2NBQ6ZUU3 175 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 DOK3Q7L591 496 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 GABRG1Q8N1C3 465 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 JAGN1Q8N5M9 183 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 BMPERQ8N8U9 685 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 WDSUB1Q8N9V3 476 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 ZNF680Q8NEM1 530 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 GJC3Q8NFK1 279 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 OR8H1Q8NGG4 311 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 OR4C16Q8NGL9 310 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 LHFPL5Q8TAF8 219 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 PAQR8Q8TEZ7 354 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 THAP3Q8WTV1 239 aaPredicted RBP7.39□□□□□ -1.23
SPG11-209ENST00000558253 KCNE4Q8WWG9 221 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 ORAI1Q96D31 301 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 SEH1LQ96EE3 360 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 CPNE2Q96FN4 548 aaPredicted RBP7.39□□□□□ -1.23
SPG11-209ENST00000558253 TMEM41AQ96HV5 264 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 OR5B2Q96R09 309 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 CDX2Q99626 313 aaPredicted RBP7.39□□□□□ -1.23
SPG11-209ENST00000558253 SMAD5Q99717 465 aaKnown RBP7.39□□□□□ -1.23
SPG11-209ENST00000558253 GINS4Q9BRT9 223 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 KRTAP4-6Q9BYQ5 205 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 APMAPQ9HDC9 416 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 SH2D2AQ9NP31 389 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 MGAT4CQ9UBM8 478 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 ZNF69Q9UC07 566 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 GLS2Q9UI32 602 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 GDF2Q9UK05 429 aaPredicted RBP7.39□□□□□ -1.23
SPG11-209ENST00000558253 ING1Q9UK53 422 aaPredicted RBP7.39□□□□□ -1.23
SPG11-209ENST00000558253 PLEKHA6Q9Y2H5 1048 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 POLR1DQ9Y2S0 133 aa7.39□□□□□ -1.23
SPG11-209ENST00000558253 CHCHD2Q9Y6H1 151 aaPredicted RBP7.39□□□□□ -1.23
SPG11-209ENST00000558253 C5orf42Q9H799 3197 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 A0A0U1RQV5 110 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 OR2M5A3KFT3 312 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 OR6C65A6NJZ3 312 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 DHRS7CA6NNS2 312 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 ZNF736B4DX44 427 aaPredicted RBP7.38□□□□□ -1.23
SPG11-209ENST00000558253 H3BML4 177 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 H3BUI4 141 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 EIF1AYO14602 144 aaKnown RBP7.38□□□□□ -1.23
SPG11-209ENST00000558253 SLC22A5O76082 557 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 WISP1O95388 367 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 TTRP02766 147 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 GSTP1P09211 210 aaKnown RBP7.38□□□□□ -1.23
SPG11-209ENST00000558253 LIFP15018 202 aa7.38□□□□□ -1.23
SPG11-209ENST00000558253 CD33P20138 364 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms