RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 IPCEF1Q8WWN9 437 aaPredicted RBP18.34■□□□□ 0.53
CASC4-204ENST00000557945 GGHQ92820 318 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 FBXW5Q969U6 566 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 PLCXD1Q9NUJ7 323 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 SCN3BQ9NY72 215 aa18.34■□□□□ 0.53
CASC4-204ENST00000557945 SLC1A7O00341 560 aa18.33■□□□□ 0.53
CASC4-204ENST00000557945 LCATP04180 440 aa18.33■□□□□ 0.53
CASC4-204ENST00000557945 KRT8P05787 483 aa18.33■□□□□ 0.53
CASC4-204ENST00000557945 CX3CR1P49238 355 aa18.33■□□□□ 0.53
CASC4-204ENST00000557945 RGS6P49758 472 aa18.33■□□□□ 0.53
CASC4-204ENST00000557945 FABP6P51161 128 aa18.33■□□□□ 0.53
CASC4-204ENST00000557945 RPS23P62266 143 aaKnown RBP18.33■□□□□ 0.53
CASC4-204ENST00000557945 CSNK2BP67870 215 aa18.33■□□□□ 0.53
CASC4-204ENST00000557945 DEGS2Q6QHC5 323 aa18.33■□□□□ 0.53
CASC4-204ENST00000557945 DHRS9Q9BPW9 319 aa18.33■□□□□ 0.53
CASC4-204ENST00000557945 BCL2L14Q9BZR8 327 aa18.33■□□□□ 0.53
CASC4-204ENST00000557945 FGF20Q9NP95 211 aaPredicted RBP18.33■□□□□ 0.53
CASC4-204ENST00000557945 TBCCD1Q9NVR7 557 aa18.33■□□□□ 0.53
CASC4-204ENST00000557945 PSORS1C1Q9UIG5 152 aa18.33■□□□□ 0.53
CASC4-204ENST00000557945 PCDHGB5Q9Y5G0 923 aa18.33■□□□□ 0.53
CASC4-204ENST00000557945 VSTM5A8MXK1 200 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 ZNF254O75437 659 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 IGHA1P01876 353 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 APOC1P02654 83 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 ANXA2P07355 339 aaKnown RBP18.32■□□□□ 0.52
CASC4-204ENST00000557945 SLC2A1P11166 492 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 OTX1P32242 354 aaPredicted RBP18.32■□□□□ 0.52
CASC4-204ENST00000557945 GLRXP35754 106 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 RIDAP52758 137 aaKnown RBP18.32■□□□□ 0.52
CASC4-204ENST00000557945 ERVS71-1P61550 626 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 PPP1CBP62140 327 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 SPATA46Q5T0L3 261 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 RGS7BPQ6MZT1 257 aaPredicted RBP18.32■□□□□ 0.52
CASC4-204ENST00000557945 AHSA2Q719I0 299 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 LHFPL3Q86UP9 236 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 YIPF7Q8N8F6 280 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 ZNF540Q8NDQ6 660 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 APOBEC3DQ96AK3 386 aaPredicted RBP18.32■□□□□ 0.52
CASC4-204ENST00000557945 DOK1Q99704 481 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 NIPAL2Q9H841 368 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 PLEKHF2Q9H8W4 249 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 BRD7Q9NPI1 651 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 INPP5EQ9NRR6 644 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 CNOT2Q9NZN8 540 aaKnown RBP18.32■□□□□ 0.52
CASC4-204ENST00000557945 MRM2Q9UI43 246 aaKnown RBP18.32■□□□□ 0.52
CASC4-204ENST00000557945 PLCE1Q9P212 2302 aa18.32■□□□□ 0.52
CASC4-204ENST00000557945 METTL15A6NJ78 407 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 PTGES3LE9PB15 166 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 ICMTO60725 284 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 DCKP27707 260 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 ZNF121P58317 390 aaPredicted RBP18.31■□□□□ 0.52
CASC4-204ENST00000557945 KRTAP10-9P60411 292 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 ST3GAL4Q11206 333 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 ZNF786Q8N393 782 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 STX19Q8N4C7 294 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 TMEM171Q8WVE6 324 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 MRPL48Q96GC5 212 aaKnown RBP18.31■□□□□ 0.52
CASC4-204ENST00000557945 TMEM80Q96HE8 168 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 ALG8Q9BVK2 526 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 C1QTNF5Q9BXJ0 243 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 ZNF442Q9H7R0 627 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 GNG8Q9UK08 70 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 FZR1Q9UM11 496 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 STARD10Q9Y365 291 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 CMAHPQ9Y471 501 aa18.31■□□□□ 0.52
CASC4-204ENST00000557945 OR4A8P0C604 315 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 PIPP12273 146 aaPredicted RBP18.3■□□□□ 0.52
CASC4-204ENST00000557945 MYL12AP19105 171 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 APOBEC3AP31941 199 aaPredicted RBP18.3■□□□□ 0.52
CASC4-204ENST00000557945 MED21Q13503 144 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 ADIPOQQ15848 244 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 TP53I3Q53FA7 332 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 ZNF544Q6NX49 715 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 PLEKHG7Q6ZR37 379 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 FAM220AQ7Z4H9 259 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 FBXL14Q8N1E6 418 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 ZNF611Q8N823 705 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 OR5L1Q8NGL2 311 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 SLC25A40Q8TBP6 338 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 COG8Q96MW5 612 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 MYCBPQ99417 103 aaPredicted RBP18.3■□□□□ 0.52
CASC4-204ENST00000557945 OR2J1Q9GZK6 312 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 ERVK13-1Q9NX77 482 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 UBAP1Q9NZ09 502 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 DIMT1Q9UNQ2 313 aaKnown RBP18.3■□□□□ 0.52
CASC4-204ENST00000557945 TPRKBQ9Y3C4 175 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 TBX1O43435 398 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 SULT1C4O75897 302 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 RPP14O95059 124 aaKnown RBP18.3■□□□□ 0.52
CASC4-204ENST00000557945 CCDC159P0C7I6 412 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 PSMA6P60900 246 aaKnown RBP18.3■□□□□ 0.52
CASC4-204ENST00000557945 GALEQ14376 348 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 ZNF829Q3KNS6 432 aaPredicted RBP18.3■□□□□ 0.52
CASC4-204ENST00000557945 COLCA1Q6ZS62 124 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 FAM57BQ71RH2 274 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 C1orf174Q8IYL3 243 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 PGAM5Q96HS1 289 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 POFUT1Q9H488 388 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 SP140LQ9H930 580 aa18.3■□□□□ 0.52
CASC4-204ENST00000557945 FAIMQ9NVQ4 179 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms