RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 FAM157CP0CG43 387 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 OSMP13725 252 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 CRABP1P29762 137 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 GCH1P30793 250 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 POLR2IP36954 125 aaKnown RBP8.78□□□□□ -1
SHMT2-224ENST00000556737 GPR6P46095 362 aaPredicted RBP8.78□□□□□ -1
SHMT2-224ENST00000556737 ZNF81P51508 661 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 COX10Q12887 443 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 KRTAP27-1Q3LI81 207 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 ZNF718Q3SXZ3 478 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 SPRNQ5BIV9 151 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 TMEM154Q6P9G4 183 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 DNM1P34Q6PK57 102 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 IL17RELQ6ZVW7 336 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 ZBTB46Q86UZ6 589 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 JAZF1Q86VZ6 243 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 C1orf174Q8IYL3 243 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 NPEPL1Q8NDH3 523 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 OR52L1Q8NGH7 329 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 OR4K13Q8NH42 304 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 DDOQ99489 341 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 IFT27Q9BW83 186 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 TEX12Q9BXU0 123 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 ELOVL3Q9HB03 270 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 RPRD1BQ9NQG5 326 aaKnown RBP8.78□□□□□ -1
SHMT2-224ENST00000556737 TBCCD1Q9NVR7 557 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 FAM118AQ9NWS6 357 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 IMPAD1Q9NX62 359 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 PLEK2Q9NYT0 353 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 GPR160Q9UJ42 338 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 KLHL21Q9UJP4 597 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 KCNS2Q9ULS6 477 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 B9D1Q9UPM9 204 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 CACNG2Q9Y698 323 aa8.78□□□□□ -1
SHMT2-224ENST00000556737 IGHV1-69-2A0A0G2JMI3 117 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 LOC100130705A0A1B0GUX0 176 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 FAM157AC9JC47 383 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 H0YAE9 185 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 CDC14BO60729 498 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 RENP00797 406 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 DBHP09172 617 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 PSKH1P11801 424 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 GGT2P36268 569 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 CRYBB2P43320 205 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 CRISP1P54107 249 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 CDC42P60953 191 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 ESRRGP62508 458 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 IL5RAQ01344 420 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.77□□□□□ -1.01
SHMT2-224ENST00000556737 PSG7Q13046 419 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 HNRNPA0Q13151 305 aaKnown RBP8.77□□□□□ -1.01
SHMT2-224ENST00000556737 TSTQ16762 297 aaKnown RBP8.77□□□□□ -1.01
SHMT2-224ENST00000556737 FAM209AQ5JX71 171 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 CLEC12AQ5QGZ9 265 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 FAM120AOSQ5T036 256 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 ZNF362Q5T0B9 420 aaPredicted RBP8.77□□□□□ -1.01
SHMT2-224ENST00000556737 SLC18B1Q6NT16 456 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 CORO6Q6QEF8 472 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 UNQ6126/PRO20091Q6UXV3 157 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 CFAP77Q6ZQR2 320 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 RASSF6Q6ZTQ3 369 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 USP51Q70EK9 711 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 C8orf59Q8N0T1 100 aaPredicted RBP8.77□□□□□ -1.01
SHMT2-224ENST00000556737 PARP8Q8N3A8 854 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 SETD9Q8NE22 299 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 OR1F12Q8NHA8 337 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 FAM81AQ8TBF8 368 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 COQ7Q99807 217 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 APOL4Q9BPW4 351 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 GABARAPL3Q9BY60 117 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 HDHD2Q9H0R4 259 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 NARFLQ9H6Q4 476 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 SAP30LQ9HAJ7 183 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 PNRC2Q9NPJ4 139 aaKnown RBP8.77□□□□□ -1.01
SHMT2-224ENST00000556737 IL20Q9NYY1 176 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 LPAR3Q9UBY5 353 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 CGGBP1Q9UFW8 167 aaPredicted RBP8.77□□□□□ -1.01
SHMT2-224ENST00000556737 LRCH1Q9Y2L9 728 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 STARD10Q9Y365 291 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 LRRC42Q9Y546 428 aa8.77□□□□□ -1.01
SHMT2-224ENST00000556737 J3QW42 95 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 DLGAP1O14490 977 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 PPIHO43447 177 aaKnown RBP8.76□□□□□ -1.01
SHMT2-224ENST00000556737 SPRY3O43610 288 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 IDH3BO43837 385 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 TGFAP01135 160 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 MT-ND5P03915 603 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 CD55P08174 381 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 KITLGP21583 273 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 NOS3P29474 1203 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 TMEM33P57088 247 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 LMO4P61968 165 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 ADARB1P78563 741 aaKnown RBP8.76□□□□□ -1.01
SHMT2-224ENST00000556737 GINS1Q14691 196 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 MOGQ16653 247 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 RSPO1Q2MKA7 263 aaPredicted RBP8.76□□□□□ -1.01
SHMT2-224ENST00000556737 CR1LQ2VPA4 569 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 SLC35F1Q5T1Q4 408 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 AVPI1Q5T686 147 aa8.76□□□□□ -1.01
SHMT2-224ENST00000556737 TMEM236Q5W0B7 351 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms