RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 AQP7O14520 342 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 SPINT2O43291 252 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 EDDM3BP56851 147 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 UBE2IP63279 158 aaKnown RBP12.68□□□□□ -0.38
VTI1B-204ENST00000554659 SYT13Q7L8C5 426 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 EMC6Q9BV81 110 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 BARHL1Q9BZE3 327 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 LINC01553A4QN01 128 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 CTRB1P17538 263 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 FGF9P31371 208 aaPredicted RBP12.68□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF85Q03923 595 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF90Q03938 601 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 ZBTB37Q5TC79 503 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 CST9Q5W186 159 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 CTRB2Q6GPI1 263 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 BAP18Q8IXM2 172 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 RELL2Q8NC24 303 aaPredicted RBP12.68□□□□□ -0.38
VTI1B-204ENST00000554659 ELSPBP1Q96BH3 223 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 WDFY2Q96P53 400 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 GPR173Q9NS66 373 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 CBY1Q9Y3M2 126 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 LOXHD1Q8IVV2 1947 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 C4orf47A7E2U8 309 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 H0YIG0 161 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 K7EQM0 130 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 FCGR2CP31995 323 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 C4orf17Q53FE4 359 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 GTF2H5Q6ZYL4 71 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 LYG2Q86SG7 212 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 GLCCI1Q86VQ1 547 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 CATSPERDQ86XM0 798 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 ARHGDIGQ99819 225 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 TXNIPQ9H3M7 391 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 A0A0A6YYD5 115 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 SCO1O75880 301 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 AANATQ16613 207 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 LCN15Q6UWW0 184 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 CNRIP1Q96F85 164 aaPredicted RBP12.68□□□□□ -0.38
VTI1B-204ENST00000554659 RBM38Q9H0Z9 239 aaKnown RBP12.68□□□□□ -0.38
VTI1B-204ENST00000554659 CYSLTR2Q9NS75 346 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 FLVCR1Q9Y5Y0 555 aa12.68□□□□□ -0.38
VTI1B-204ENST00000554659 HRO43593 1189 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF354AO60765 605 aaPredicted RBP12.67□□□□□ -0.38
VTI1B-204ENST00000554659 UBE2MP61081 183 aaKnown RBP12.67□□□□□ -0.38
VTI1B-204ENST00000554659 SNRPNP63162 240 aaKnown RBP12.67□□□□□ -0.38
VTI1B-204ENST00000554659 TEX261Q6UWH6 196 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 BTNL8Q6UX41 500 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 Q6ZRG5 221 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 OR52N5Q8NH56 324 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 DHRS9Q9BPW9 319 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF251Q9BRH9 671 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 PLSCR3Q9NRY6 295 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 ASH2LQ9UBL3 628 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 A4GNTQ9UNA3 340 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 U3KQ87 197 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 MYO9BQ13459 2157 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF727A8MUV8 499 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 DEGS1O15121 323 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 PNPP00491 289 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 QDPRP09417 244 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 GALP22466 123 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 RPL12P30050 165 aaKnown RBP12.67□□□□□ -0.38
VTI1B-204ENST00000554659 DCTDP32321 178 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 OR1D5P58170 312 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 UBE2G1P62253 170 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 OR5B3Q8NH48 314 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 C16orf52Q8NHV5 167 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 SLC5A6Q9Y289 635 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 E5RGE8 158 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 TO15178 435 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 S100A8P05109 93 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 IL10RAQ13651 578 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 EXD3Q8N9H8 876 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 OR2A1Q8NGT9 310 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 SHARPINQ9H0F6 387 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 SLC6A13Q9NSD5 602 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 KCNG2Q9UJ96 466 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 NSG2Q9Y328 171 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 IL5P05113 134 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 RAB1AP62820 205 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 B4GALNT1Q00973 533 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 TBC1D28Q2M2D7 210 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 SLC25A35Q3KQZ1 300 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF468Q5VIY5 522 aaPredicted RBP12.67□□□□□ -0.38
VTI1B-204ENST00000554659 TMEM88Q6PEY1 159 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 MORN4Q8NDC4 146 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 OR2G2Q8NGZ5 317 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 OR2A14Q96R47 310 aa12.67□□□□□ -0.38
VTI1B-204ENST00000554659 ANKRD61A6NGH8 418 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 TGOLN2O43493 480 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 AGERQ15109 404 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 CLEC9AQ6UXN8 241 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 THNSL2Q86YJ6 484 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 SIGLEC11Q96RL6 698 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 SLC35D1Q9NTN3 355 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF586Q9NXT0 402 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 CTSFQ9UBX1 484 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 BCL2L11O43521 198 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 NKAIN1Q4KMZ8 207 aa12.66□□□□□ -0.38
VTI1B-204ENST00000554659 ZNF628Q5EBL2 1059 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms