RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 ZNF133P52736 654 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-224ENST00000554040 CLRN1P58418 232 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 MELKQ14680 651 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 SPANXN4Q5MJ08 99 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 C10orf53Q8N6V4 93 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 PAPD5Q8NDF8 572 aaKnown RBP5.59□□□□□ -1.51
ATXN3-224ENST00000554040 OR5AN1Q8NGI8 311 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 OR2T6Q8NHC8 308 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 PTP4A1Q93096 173 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 NABP1Q96AH0 204 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 SLC7A6OSQ96CW6 309 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-224ENST00000554040 TMEM19Q96HH6 336 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 TECTBQ96PL2 329 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 FMO2Q99518 471 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 MRPL13Q9BYD1 178 aaKnown RBP5.59□□□□□ -1.51
ATXN3-224ENST00000554040 WNT5BQ9H1J7 359 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 SEMA6AQ9H2E6 1030 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 POFUT1Q9H488 388 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 TBCCD1Q9NVR7 557 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 MKS1Q9NXB0 559 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 GAR1Q9NY12 217 aaKnown RBP5.59□□□□□ -1.51
ATXN3-224ENST00000554040 SELENONQ9NZV5 590 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 PSMC3IPQ9P2W1 217 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-224ENST00000554040 TIMM10BQ9Y5J6 103 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 DMRT1Q9Y5R6 373 aa5.59□□□□□ -1.51
ATXN3-224ENST00000554040 CENPBD1B2RD01 187 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 RNF13O43567 381 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 DNAJC8O75937 253 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-224ENST00000554040 ABHD16AO95870 558 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 OPN1SWP03999 348 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 ETFAP13804 333 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 ECHS1P30084 290 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 S100A3P33764 101 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 CDKN2CP42773 168 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 MVDP53602 400 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 CLNS1AP54105 237 aaKnown RBP5.58□□□□□ -1.52
ATXN3-224ENST00000554040 ERVK-25P63136 954 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 MRPS34P82930 218 aaKnown RBP5.58□□□□□ -1.52
ATXN3-224ENST00000554040 EGFEM1PQ0D2K5 195 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 DCTN2Q13561 401 aaKnown RBP5.58□□□□□ -1.52
ATXN3-224ENST00000554040 PCLAFQ15004 111 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 OR1Q1Q15612 314 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 SGCAQ16586 387 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 C10orf128Q5T292 105 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 FAM27BQ5VT28 67 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 METAP1DQ6UB28 335 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-224ENST00000554040 RNF144BQ7Z419 303 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 IGFN1Q86VF2 1251 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 MOGAT3Q86VF5 341 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 NPEPL1Q8NDH3 523 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 OR4C13Q8NGP0 309 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 OR13G1Q8NGZ3 307 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 MUC7Q8TAX7 377 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 IFT81Q8WYA0 676 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 PANX1Q96RD7 426 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 SEPHS2Q99611 448 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 CITED2Q99967 270 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-224ENST00000554040 TMEM43Q9BTV4 400 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 OR2H1Q9GZK4 316 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 RANBP3Q9H6Z4 567 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-224ENST00000554040 TMEM27Q9HBJ8 222 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 CTSZQ9UBR2 303 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 TMCC3Q9ULS5 477 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 STARD10Q9Y365 291 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 UGT2A1Q9Y4X1 527 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 MAB21L2Q9Y586 359 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 KPTNQ9Y664 436 aa5.58□□□□□ -1.52
ATXN3-224ENST00000554040 A0A0B4J2E0 115 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 IGHV3-64DA0A0J9YX35 117 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 A0A1B0GX12 115 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 TMEM247A6NEH6 219 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 E9PBE3 544 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 COPEO14579 308 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 TRMUO75648 421 aaKnown RBP5.57□□□□□ -1.52
ATXN3-224ENST00000554040 SLC2A10O95528 541 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 DUS4LO95620 317 aaKnown RBP5.57□□□□□ -1.52
ATXN3-224ENST00000554040 ECDO95905 644 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-224ENST00000554040 IRF2P14316 349 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 EEF1B2P24534 225 aaKnown RBP5.57□□□□□ -1.52
ATXN3-224ENST00000554040 ALDH3A1P30838 453 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 PRKAR1BP31321 381 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 SERPINB5P36952 375 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 ERFP50548 548 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 DSTNP60981 165 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 PCBD1P61457 104 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 KCNJ8Q15842 424 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 CDONQ4KMG0 1287 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 CEP85LQ5SZL2 805 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 NXNQ6DKJ4 435 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 C8orf74Q6P047 294 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 BTN2A1Q7KYR7 527 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 ZNF572Q7Z3I7 529 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-224ENST00000554040 VMO1Q7Z5L0 202 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 NUDCD3Q8IVD9 361 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 OR5AS1Q8N127 324 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 C19orf18Q8NEA5 215 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 OR8G5Q8NG78 346 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 OR10AD1Q8NGE0 317 aa5.57□□□□□ -1.52
ATXN3-224ENST00000554040 WIPF2Q8TF74 440 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-224ENST00000554040 ERGIC1Q969X5 290 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms