RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 RGS1Q08116 209 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 FUT7Q11130 342 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 MSLNQ13421 630 aaPredicted RBP2.28□□□□□ -2.04
CNOT2-216ENST00000548939 PAFAH1B3Q15102 231 aaKnown RBP2.28□□□□□ -2.04
CNOT2-216ENST00000548939 UNC50Q53HI1 259 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 PAGE2BQ5JRK9 111 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 RAET1LQ5VY80 246 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 SAXO2Q658L1 398 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 TIGD3Q6B0B8 471 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 PTRHD1Q6GMV3 140 aaKnown RBP2.28□□□□□ -2.04
CNOT2-216ENST00000548939 OR5M10Q6IEU7 315 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 NIPAL1Q6NVV3 410 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 C16orf54Q6UWD8 224 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 CES3Q6UWW8 571 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 B3GLCTQ6Y288 498 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 KRT77Q7Z794 578 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 ANKRD46Q86W74 232 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 PHF13Q86YI8 300 aaPredicted RBP2.28□□□□□ -2.04
CNOT2-216ENST00000548939 ERI1Q8IV48 349 aaKnown RBP2.28□□□□□ -2.04
CNOT2-216ENST00000548939 C9orf40Q8IXQ3 194 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 KRT222Q8N1A0 295 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 CA13Q8N1Q1 262 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 Q8NFD4 153 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 OR9A1PQ8NGU1 263 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 OR8K3Q8NH51 312 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 CLDND2Q8NHS1 167 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 LKAAEAR1Q8TD35 194 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.28□□□□□ -2.04
CNOT2-216ENST00000548939 SRSF12Q8WXF0 261 aaKnown RBP2.28□□□□□ -2.04
CNOT2-216ENST00000548939 DHTKD1Q96HY7 919 aaPredicted RBP2.28□□□□□ -2.04
CNOT2-216ENST00000548939 RAB40CQ96S21 281 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 ST6GALNAC5Q9BVH7 336 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 OR10A4Q9H209 315 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 TSPY26PQ9H489 355 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 HOOK1Q9UJC3 728 aaKnown RBP2.28□□□□□ -2.04
CNOT2-216ENST00000548939 MGAT4BQ9UQ53 548 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 MRPS33Q9Y291 106 aaKnown RBP2.28□□□□□ -2.04
CNOT2-216ENST00000548939 SLC22A7Q9Y694 548 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 NACAE9PAV3 2078 aa2.28□□□□□ -2.04
CNOT2-216ENST00000548939 TET2Q6N021 2002 aaPredicted RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 KCNE1BA0A087WTH5 132 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 SH3PXD2BA1X283 911 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 PPIHO43447 177 aaKnown RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 LCMT2O60294 686 aaKnown RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 CBR3O75828 277 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 WISP3O95389 354 aaPredicted RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 SYNGR4O95473 234 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 ETHE1O95571 254 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 GOT2P00505 430 aaKnown RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 UCHL3P15374 230 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 CMA1P23946 247 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 CASP3P42574 277 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 GPR6P46095 362 aaPredicted RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 SLC6A8P48029 635 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 TMED10P49755 219 aaKnown RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 HNRNPFP52597 415 aaKnown RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 ZNF140P52738 457 aaPredicted RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 HSD17B7P56937 341 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 POLR2FP61218 127 aaKnown RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 DYNLT1P63172 113 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 TNFRSF17Q02223 184 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 DPYSL3Q14195 570 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 RPS6KA1Q15418 735 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 NNATQ16517 81 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 HADHQ16836 314 aaKnown RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 TPD52L1Q16890 204 aaPredicted RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 TEX44Q53QW1 395 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 HSP90AA4PQ58FG1 418 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 ACSM5Q6NUN0 579 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 SLC30A6Q6NXT4 461 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 PID1Q7Z2X4 250 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 C17orf64Q86WR6 236 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 CCDC50Q8IVM0 306 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 CNTN4Q8IWV2 1026 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 MCOLN2Q8IZK6 566 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 ZCCHC24Q8N2G6 241 aaKnown RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 TBC1D19Q8N5T2 526 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 MFSD9Q8NBP5 474 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 OR5M1Q8NGP8 315 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 KIF18AQ8NI77 898 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 NUBPLQ8TB37 319 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 PPWD1Q96BP3 646 aaKnown RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 PANX2Q96RD6 677 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 OSBPL11Q9BXB4 747 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 CENPHQ9H3R5 247 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 ZNF702PQ9H963 129 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 DYNLRB1Q9NP97 96 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 FAM114A2Q9NRY5 505 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 NKIRAS2Q9NYR9 191 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 FETUBQ9UGM5 382 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 RPUSD1Q9UJJ7 312 aaKnown RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 NUP50Q9UKX7 468 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 CFAP45Q9UL16 551 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 MCTS1Q9ULC4 181 aaKnown RBP2.27□□□□□ -2.05
CNOT2-216ENST00000548939 ZNF175Q9Y473 711 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 ARFGEF3Q5TH69 2177 aa2.27□□□□□ -2.05
CNOT2-216ENST00000548939 HEATR1Q9H583 2144 aaKnown RBP2.26□□□□□ -2.05
CNOT2-216ENST00000548939 STARD9Q9P2P6 4700 aa2.26□□□□□ -2.05
CNOT2-216ENST00000548939 MDFIC2A0A1B0GVS7 189 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms