RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 F5H5K5 113 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 M0R135 149 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 ZNF593O00488 134 aaPredicted RBP13.5□□□□□ -0.25
TSKU-204ENST00000533752 TLX2O43763 284 aaPredicted RBP13.5□□□□□ -0.25
TSKU-204ENST00000533752 CD5LO43866 347 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 NCR1O76036 304 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 ACSM4P0C7M7 580 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 SELEP16581 610 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 TNFSF4P23510 183 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 MAGEB1P43366 347 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 CCL8P80075 99 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 PPP2R2BQ00005 443 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 MALLQ13021 153 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 PSG7Q13046 419 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 RIN1Q13671 783 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 TAF13Q15543 124 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 SLC35D3Q5M8T2 416 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 KDM4DQ6B0I6 523 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 LYPD4Q6UWN0 246 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 FBXW12Q6X9E4 464 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 COLCA1Q6ZS62 124 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 SHFQ7M4L6 423 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 AMIGO2Q86SJ2 522 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 ZNF511Q8NB15 262 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 HAVCR1Q96D42 359 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 CMBLQ96DG6 245 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 ZNF799Q96GE5 643 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 COPS4Q9BT78 406 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 OR51V1Q9H2C8 321 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 MED20Q9H944 212 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 MARCH7Q9H992 704 aa13.5□□□□□ -0.25
TSKU-204ENST00000533752 CR1P17927 2039 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 ZSCAN5BA6NJL1 495 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 SPRY3O43610 288 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 CD55P08174 381 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 IGFBP5P24593 272 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 OTX1P32242 354 aaPredicted RBP13.49□□□□□ -0.25
TSKU-204ENST00000533752 RPS27P42677 84 aaKnown RBP13.49□□□□□ -0.25
TSKU-204ENST00000533752 SLC15A1P46059 708 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 SLC6A9P48067 706 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 GZMKP49863 264 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 CHN2P52757 468 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 TMEM33P57088 247 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 GRB2P62993 217 aaKnown RBP13.49□□□□□ -0.25
TSKU-204ENST00000533752 KRTAP1-1Q07627 177 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 KPNB1Q14974 876 aaKnown RBP13.49□□□□□ -0.25
TSKU-204ENST00000533752 SNAPC1Q16533 368 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 DRAM2Q6UX65 266 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 Q71RC1 249 aaPredicted RBP13.49□□□□□ -0.25
TSKU-204ENST00000533752 ERI1Q8IV48 349 aaKnown RBP13.49□□□□□ -0.25
TSKU-204ENST00000533752 CPOQ8IVL8 374 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 OR6N2Q8NGY6 317 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 PYDC1Q8WXC3 89 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 SLAMF6Q96DU3 332 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 ELMOD3Q96FG2 381 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 HCAR1Q9BXC0 346 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 POFUT1Q9H488 388 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 PTTG3PQ9NZH4 202 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 ZFHX3Q15911 3703 aa13.49□□□□□ -0.25
TSKU-204ENST00000533752 NIPBLQ6KC79 2804 aaeCLIP13.49□□□□□ -0.25
TSKU-204ENST00000533752 IGHV4-61A0A0C4DH41 118 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 IGHV1-69-2A0A0G2JMI3 117 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 IGHV1-46P01743 117 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 APOC1P02654 83 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 LCATP04180 440 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 TACSTD2P09758 323 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 GPR6P46095 362 aaPredicted RBP13.48□□□□□ -0.25
TSKU-204ENST00000533752 RPS7P62081 194 aaKnown RBP13.48□□□□□ -0.25
TSKU-204ENST00000533752 EIF2B1Q14232 305 aaKnown RBP13.48□□□□□ -0.25
TSKU-204ENST00000533752 PTGES3Q15185 160 aaKnown RBP13.48□□□□□ -0.25
TSKU-204ENST00000533752 TSTQ16762 297 aaKnown RBP13.48□□□□□ -0.25
TSKU-204ENST00000533752 RSPO1Q2MKA7 263 aaPredicted RBP13.48□□□□□ -0.25
TSKU-204ENST00000533752 KLHL12Q53G59 568 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 TMEM255AQ5JRV8 349 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 LCN1P1Q5VSP4 162 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 TMEM236Q5W0B7 351 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 RHOUQ7L0Q8 258 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 CXXC5Q7LFL8 322 aaKnown RBP13.48□□□□□ -0.25
TSKU-204ENST00000533752 DPY19L4Q7Z388 723 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 TIGD4Q8IY51 512 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 ZNF454Q8N9F8 522 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 OR10S1Q8NGN2 331 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 ST7LQ8TDW4 575 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 GTF3AQ92664 365 aaKnown RBP13.48□□□□□ -0.25
TSKU-204ENST00000533752 HPS1Q92902 700 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 KCNJ15Q99712 375 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 RBM4BQ9BQ04 359 aaKnown RBP13.48□□□□□ -0.25
TSKU-204ENST00000533752 SEMA6AQ9H2E6 1030 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 TOR3AQ9H497 397 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 SP140LQ9H930 580 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 TVP23BQ9NYZ1 205 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 OAZ3Q9UMX2 235 aa13.48□□□□□ -0.25
TSKU-204ENST00000533752 CHD3Q12873 2000 aaKnown RBP13.47□□□□□ -0.25
TSKU-204ENST00000533752 LYNX1G3V0Z9 82 aa13.47□□□□□ -0.25
TSKU-204ENST00000533752 RP2O75695 350 aa13.47□□□□□ -0.25
TSKU-204ENST00000533752 LYNX1P0DP58 116 aa13.47□□□□□ -0.25
TSKU-204ENST00000533752 CRYBB2P43320 205 aa13.47□□□□□ -0.25
TSKU-204ENST00000533752 TNFAIP6P98066 277 aaPredicted RBP13.47□□□□□ -0.25
TSKU-204ENST00000533752 SLC3A1Q07837 685 aa13.47□□□□□ -0.25
TSKU-204ENST00000533752 CDK5R2Q13319 367 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms