RNA–Protein interactions for RNA: ENST00000533717.5

PSMD13-213, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 2

Gene PSMD13, Length 670 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-213	ENST00000533717	KITLG	P21583	273 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	ACHE	P22303	614 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	COL8A2	P25067	703 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	CCL8	P80075	99 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	RIN1	Q13671	783 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	KPNB1	Q14974	876 aa	Known RBP	13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	TMEM249	Q2WGJ8	235 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	FAM209A	Q5JX71	171 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	KDM4D	Q6B0I6	523 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	PYDC1	Q8WXC3	89 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	SPTSSA	Q969W0	71 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	CMBL	Q96DG6	245 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	CENPN	Q96H22	339 aa	Predicted RBP	13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	INTS14	Q96SY0	518 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	C1QTNF5	Q9BXJ0	243 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	MARCH7	Q9H992	704 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	DECR2	Q9NUI1	292 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717	PTTG3P	Q9NZH4	202 aa		13.27	□□□□□ -0.29
PSMD13-213	ENST00000533717		M0R135	149 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	PRODH	O43272	600 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	TPD52L2	O43399	206 aa	Known RBP	13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	SPRY3	O43610	288 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	CD5L	O43866	347 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	MITF	O75030	526 aa	Predicted RBP	13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	DYSF	O75923	2080 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	IGHV1-46	P01743	117 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	ADH4	P08319	380 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	GSTT1	P30711	240 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	TPTE	P56180	551 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	PTGES3	Q15185	160 aa	Known RBP	13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	TST	Q16762	297 aa	Known RBP	13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	CSPG4	Q6UVK1	2322 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	FBXW12	Q6X9E4	464 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	ERI1	Q8IV48	349 aa	Known RBP	13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	CPO	Q8IVL8	374 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	OR6N2	Q8NGY6	317 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	ST7L	Q8TDW4	575 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	YIPF5	Q969M3	257 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	SLAMF6	Q96DU3	332 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	ZNF799	Q96GE5	643 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	DIRC2	Q96SL1	478 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	SEMA6A	Q9H2E6	1030 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	TVP23B	Q9NYZ1	205 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	ZDHHC8	Q9ULC8	765 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	NSD1	Q96L73	2696 aa	Predicted RBP	13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	TLN2	Q9Y4G6	2542 aa		13.26	□□□□□ -0.29
PSMD13-213	ENST00000533717	IGHV4-61	A0A0C4DH41	118 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	ZNF878	C9JN71	531 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	RP2	O75695	350 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	LCAT	P04180	440 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	TACSTD2	P09758	323 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	OTX1	P32242	354 aa	Predicted RBP	13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	CRYBB2	P43320	205 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	EIF2B1	Q14232	305 aa	Known RBP	13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	HLX	Q14774	488 aa	Predicted RBP	13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	SNAPC1	Q16533	368 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	SLC35D3	Q5M8T2	416 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	ZFP1	Q6P2D0	407 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	USP51	Q70EK9	711 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	CXXC5	Q7LFL8	322 aa	Known RBP	13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	SHF	Q7M4L6	423 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	DPY19L4	Q7Z388	723 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	NAA40	Q86UY6	237 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	TIGD4	Q8IY51	512 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	C10orf67	Q8IYJ2	551 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	ZMYND19	Q96E35	227 aa	Predicted RBP	13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	COPS4	Q9BT78	406 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	PRRG3	Q9BZD7	231 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	SAP30L	Q9HAJ7	183 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	MSL2	Q9HCI7	577 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	CENPM	Q9NSP4	180 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	ENOPH1	Q9UHY7	261 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	OAZ3	Q9UMX2	235 aa		13.25	□□□□□ -0.29
PSMD13-213	ENST00000533717	SETD2	Q9BYW2	2564 aa	Predicted RBP	13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	IGHV1-69-2	A0A0G2JMI3	117 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	TLX2	O43763	284 aa	Predicted RBP	13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	CDC14B	O60729	498 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	CD55	P08174	381 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	IGFBP5	P24593	272 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	GPR6	P46095	362 aa	Predicted RBP	13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	SLC6A9	P48067	706 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	CHN2	P52757	468 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	TMEM33	P57088	247 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	MALL	Q13021	153 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	CDK5R2	Q13319	367 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	TAF13	Q15543	124 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	KLHL12	Q53G59	568 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	DRAM2	Q6UX65	266 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	BBS1	Q8NFJ9	593 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	KCNJ15	Q99712	375 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	CIB1	Q99828	191 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	EGLN1	Q9GZT9	426 aa		13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.24	□□□□□ -0.29
PSMD13-213	ENST00000533717	C2CD3	Q4AC94	2353 aa		13.23	□□□□□ -0.29
PSMD13-213	ENST00000533717	MALRD1	Q5VYJ5	2156 aa		13.23	□□□□□ -0.29
PSMD13-213	ENST00000533717	SAC3D1	A6NKF1	404 aa		13.23	□□□□□ -0.29
PSMD13-213	ENST00000533717	ZAR1L	A6NP61	321 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms