RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 IPCEF1Q8WWN9 437 aaPredicted RBP6.9□□□□□ -1.31
TRIM49-202ENST00000532501 MUCL1Q96DR8 90 aa6.9□□□□□ -1.31
TRIM49-202ENST00000532501 SLAMF6Q96DU3 332 aa6.9□□□□□ -1.31
TRIM49-202ENST00000532501 RNFT2Q96EX2 444 aa6.9□□□□□ -1.31
TRIM49-202ENST00000532501 CCNB1IP1Q9NPC3 277 aa6.9□□□□□ -1.31
TRIM49-202ENST00000532501 INPP5EQ9NRR6 644 aa6.9□□□□□ -1.31
TRIM49-202ENST00000532501 SLCO1C1Q9NYB5 712 aa6.9□□□□□ -1.31
TRIM49-202ENST00000532501 PLEK2Q9NYT0 353 aa6.9□□□□□ -1.31
TRIM49-202ENST00000532501 ZNF319Q9P2F9 582 aa6.9□□□□□ -1.31
TRIM49-202ENST00000532501 KCNN3Q9UGI6 736 aa6.9□□□□□ -1.31
TRIM49-202ENST00000532501 NDRG3Q9UGV2 375 aa6.9□□□□□ -1.31
TRIM49-202ENST00000532501 ZNF670-ZNF695F2Z2N8 137 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 MRPS14O60783 128 aaKnown RBP6.89□□□□□ -1.31
TRIM49-202ENST00000532501 TNFAIP8O95379 198 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 RAB36O95755 333 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 OR2T7P0C7T2 308 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 FAM157BP0CG42 384 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 MYL12AP19105 171 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 DCKP27707 260 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 OTX1P32242 354 aaPredicted RBP6.89□□□□□ -1.31
TRIM49-202ENST00000532501 ARR3P36575 388 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 OPRL1P41146 370 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 PRKXP51817 358 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 GABARAPL2P60520 117 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 EIF2B1Q14232 305 aaKnown RBP6.89□□□□□ -1.31
TRIM49-202ENST00000532501 RAB35Q15286 201 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 ELFN2Q5R3F8 820 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 SPATA46Q5T0L3 261 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 ZNF684Q5T5D7 378 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 TMEM53Q6P2H8 277 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 KCTD18Q6PI47 426 aaPredicted RBP6.89□□□□□ -1.31
TRIM49-202ENST00000532501 RHOUQ7L0Q8 258 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 LRP11Q86VZ4 500 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 ALDH16A1Q8IZ83 802 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 STX19Q8N4C7 294 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 FAM169BQ8N8A8 192 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 SLC30A7Q8NEW0 376 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 GJC3Q8NFK1 279 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 OR52I1Q8NGK6 324 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 OR2T27Q8NH04 317 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 OR1F12Q8NHA8 337 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 RNF133Q8WVZ7 376 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 ASB17Q8WXJ9 295 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 GTF3AQ92664 365 aaKnown RBP6.89□□□□□ -1.31
TRIM49-202ENST00000532501 MYDGFQ969H8 173 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 PPP1R14AQ96A00 147 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 COPS4Q9BT78 406 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 SOX7Q9BT81 388 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 C1orf198Q9H425 327 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 PLEKHF2Q9H8W4 249 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 DDX28Q9NUL7 540 aaKnown RBP6.89□□□□□ -1.31
TRIM49-202ENST00000532501 CHCHD3Q9NX63 227 aaKnown RBP6.89□□□□□ -1.31
TRIM49-202ENST00000532501 MYEF2Q9P2K5 600 aaKnown RBP6.89□□□□□ -1.31
TRIM49-202ENST00000532501 MRM2Q9UI43 246 aaKnown RBP6.89□□□□□ -1.31
TRIM49-202ENST00000532501 PSORS1C1Q9UIG5 152 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 LAMP5Q9UJQ1 280 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 FZR1Q9UM11 496 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 EXOGQ9Y2C4 368 aaKnown RBP6.89□□□□□ -1.31
TRIM49-202ENST00000532501 RNF115Q9Y4L5 304 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 TIMM10BQ9Y5J6 103 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 LRBAP50851 2863 aa6.89□□□□□ -1.31
TRIM49-202ENST00000532501 A0A1W2PQL4 384 aaPredicted RBP6.88□□□□□ -1.31
TRIM49-202ENST00000532501 C5orf49A4QMS7 147 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 SMPD2O60906 423 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 PTHP01270 115 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 LYNP07948 512 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 HTR1AP08908 422 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 ACSM4P0C7M7 580 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 CCNOP22674 350 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 CRHBPP24387 322 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 EEF1B2P24534 225 aaKnown RBP6.88□□□□□ -1.31
TRIM49-202ENST00000532501 PTAFRP25105 342 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 STOMP27105 288 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 RBMXP38159 391 aaKnown RBP6.88□□□□□ -1.31
TRIM49-202ENST00000532501 MPV17P39210 176 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 CHN2P52757 468 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 ACTA2P62736 377 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 ACTG2P63267 376 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 PLP2Q04941 152 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 EGR3Q06889 387 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 MFGE8Q08431 387 aaPredicted RBP6.88□□□□□ -1.31
TRIM49-202ENST00000532501 SNTB2Q13425 540 aaKnown RBP6.88□□□□□ -1.31
TRIM49-202ENST00000532501 SNAI3Q3KNW1 292 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 ALKBH6Q3KRA9 238 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 VHLLQ6RSH7 139 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 PRSS45Q7RTY3 260 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 EGFL6Q8IUX8 553 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 ACBD7Q8N6N7 88 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 THEM6Q8WUY1 208 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 AKAP1Q92667 903 aaKnown RBP eCLIP6.88□□□□□ -1.31
TRIM49-202ENST00000532501 GGHQ92820 318 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 TMEM80Q96HE8 168 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 RADILQ96JH8 1075 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 NR1H4Q96RI1 486 aaPredicted RBP6.88□□□□□ -1.31
TRIM49-202ENST00000532501 SIGLEC11Q96RL6 698 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 COQ7Q99807 217 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 FGF20Q9NP95 211 aaPredicted RBP6.88□□□□□ -1.31
TRIM49-202ENST00000532501 NGBQ9NPG2 151 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 CENPMQ9NSP4 180 aa6.88□□□□□ -1.31
TRIM49-202ENST00000532501 CLEC2DQ9UHP7 191 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms