RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 POU1F1P28069 291 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 IL2RGP31785 369 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 RPS27P42677 84 aaKnown RBP13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 GPR6P46095 362 aaPredicted RBP13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 RGS6P49758 472 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 CHN2P52757 468 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 HLXQ14774 488 aaPredicted RBP13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 SPRNQ5BIV9 151 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 FAM209AQ5JX71 171 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 SLC27A4Q6P1M0 643 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 FBXW12Q6X9E4 464 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 Q6ZR03 302 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 ASRGL1Q7L266 308 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 TEX47Q8TBZ9 253 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 C1orf159Q96HA4 380 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 MED20Q9H944 212 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 ZNF556Q9HAH1 456 aa13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 CGGBP1Q9UFW8 167 aaPredicted RBP13.71□□□□□ -0.21
PDLIM5-212ENST00000509333 RIIAD1A6NNX1 92 aa13.7□□□□□ -0.22
PDLIM5-212ENST00000509333 DEAF1O75398 565 aaPredicted RBP13.7□□□□□ -0.22
PDLIM5-212ENST00000509333 CD55P08174 381 aa13.7□□□□□ -0.22
PDLIM5-212ENST00000509333 DAPP51397 102 aa13.7□□□□□ -0.22
PDLIM5-212ENST00000509333 BLVRAP53004 296 aa13.7□□□□□ -0.22
PDLIM5-212ENST00000509333 CCNIQ14094 377 aa13.7□□□□□ -0.22
PDLIM5-212ENST00000509333 USP51Q70EK9 711 aa13.7□□□□□ -0.22
PDLIM5-212ENST00000509333 PRIMA1Q86XR5 153 aa13.7□□□□□ -0.22
PDLIM5-212ENST00000509333 DIRC2Q96SL1 478 aa13.7□□□□□ -0.22
PDLIM5-212ENST00000509333 ATF6BQ99941 703 aa13.7□□□□□ -0.22
PDLIM5-212ENST00000509333 PTTG3PQ9NZH4 202 aa13.7□□□□□ -0.22
PDLIM5-212ENST00000509333 AP4S1Q9Y587 144 aa13.7□□□□□ -0.22
PDLIM5-212ENST00000509333 CACNG2Q9Y698 323 aa13.7□□□□□ -0.22
PDLIM5-212ENST00000509333 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.7□□□□□ -0.224e-6■□□□□ 9.7
PDLIM5-212ENST00000509333 IGHV1-69-2A0A0G2JMI3 117 aa13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 LOC100289279A0A1B0GTE1 492 aa13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 FAM183AA6NL82 134 aa13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 PPIHO43447 177 aaKnown RBP13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 TIMM8AO60220 97 aaPredicted RBP13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 LMX1BO60663 402 aa13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 ZNF3P17036 446 aa13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 ENTPD1P49961 510 aa13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 ATP6AP1Q15904 470 aa13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 C1orf146Q5VVC0 180 aa13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 TMEM236Q5W0B7 351 aa13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 FAHD1Q6P587 224 aa13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 ATG16L2Q8NAA4 619 aa13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 OR5K1Q8NHB7 308 aa13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 EGLN1Q9GZT9 426 aa13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 MARCH7Q9H992 704 aa13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 COMMD3-BMI1R4GMX3 469 aa13.69□□□□□ -0.22
PDLIM5-212ENST00000509333 SURF4O15260 269 aa13.68□□□□□ -0.22
PDLIM5-212ENST00000509333 TPD52L2O43399 206 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-212ENST00000509333 GLCEO94923 617 aa13.68□□□□□ -0.22
PDLIM5-212ENST00000509333 TGFAP01135 160 aa13.68□□□□□ -0.22
PDLIM5-212ENST00000509333 LCATP04180 440 aa13.68□□□□□ -0.22
PDLIM5-212ENST00000509333 OTX1P32242 354 aaPredicted RBP13.68□□□□□ -0.22
PDLIM5-212ENST00000509333 CRISP1P54107 249 aa13.68□□□□□ -0.22
PDLIM5-212ENST00000509333 TPTEP56180 551 aa13.68□□□□□ -0.22
PDLIM5-212ENST00000509333 LMO4P61968 165 aa13.68□□□□□ -0.22
PDLIM5-212ENST00000509333 OR2T2Q6IF00 324 aa13.68□□□□□ -0.22
PDLIM5-212ENST00000509333 DCXRQ7Z4W1 244 aa13.68□□□□□ -0.22
PDLIM5-212ENST00000509333 ST7LQ8TDW4 575 aa13.68□□□□□ -0.22
PDLIM5-212ENST00000509333 ELMOD3Q96FG2 381 aa13.68□□□□□ -0.22
PDLIM5-212ENST00000509333 DDX28Q9NUL7 540 aaKnown RBP13.68□□□□□ -0.22
PDLIM5-212ENST00000509333 TMEM160Q9NX00 188 aa13.68□□□□□ -0.22
PDLIM5-212ENST00000509333 SPARCP09486 303 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 FASP25445 335 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 GSTT1P30711 240 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 GK2Q14410 553 aaPredicted RBP13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 HFEQ30201 348 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 ZMAT1Q5H9K5 638 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 PLBD1Q6P4A8 553 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 AMIGO2Q86SJ2 522 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 CPOQ8IVL8 374 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 OR8G5Q8NG78 346 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 OR6K6Q8NGW6 343 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 CLDND2Q8NHS1 167 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 CCL17Q92583 94 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 SPTSSAQ969W0 71 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 OR51V1Q9H2C8 321 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 SAP30LQ9HAJ7 183 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 CENPMQ9NSP4 180 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 TREM2Q9NZC2 230 aa13.67□□□□□ -0.22
PDLIM5-212ENST00000509333 SVEP1Q4LDE5 3571 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 C5orf63A6NC05 138 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 PRR23D1E9PI22 279 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 G3V2T6 193 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 PRR23D2P0DMB1 279 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 ANOS1P23352 680 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 TNFAIP6P98066 277 aaPredicted RBP13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 PTGES3Q15185 160 aaKnown RBP13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 FAM166AQ6J272 317 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 DPY19L4Q7Z388 723 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 TIGD4Q8IY51 512 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 OR5AS1Q8N127 324 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 PARP8Q8N3A8 854 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 LINC01356Q8N9X3 169 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 OR2Z1Q8NG97 314 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 OR13G1Q8NGZ3 307 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 DNAJC9Q8WXX5 260 aa13.66□□□□□ -0.22
PDLIM5-212ENST00000509333 LRTOMTQ8WZ04 291 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms