RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 F5H5P2 479 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 H0YAE9 185 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 LGALS8O00214 317 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 LSM1O15116 133 aaKnown RBP3.1□□□□□ -1.91
RNF4-211ENST00000509206 LDLRAD4O15165 306 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 NDUFB3O43676 98 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 GLRA3O75311 464 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 FSTL3O95633 263 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 CPSF4O95639 269 aaKnown RBP3.1□□□□□ -1.91
RNF4-211ENST00000509206 CHEK2O96017 543 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 GYPAP02724 150 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 GUSBP08236 651 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 FRMD6-AS1P0C7T7 363 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 ADORA3P0DMS8 318 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 RAP2AP10114 183 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 NR2F1P10589 423 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 ETFAP13804 333 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 ZNF32P17041 273 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 SDC1P18827 310 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 IMPDH1P20839 514 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 KITLGP21583 273 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 CHI3L1P36222 383 aaPredicted RBP3.1□□□□□ -1.91
RNF4-211ENST00000509206 ANP32AP39687 249 aaKnown RBP3.1□□□□□ -1.91
RNF4-211ENST00000509206 PSMB10P40306 273 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 WNT5AP41221 380 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 MAGEA4P43358 317 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 THBS3P49746 956 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 VEGFCP49767 419 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 RAD23AP54725 363 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 PCBD1P61457 104 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 DR1Q01658 176 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 PUDPQ08623 228 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 CALCOCO2Q13137 446 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 KLRD1Q13241 179 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 KRT72Q14CN4 511 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 NPTX1Q15818 432 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 AANATQ16613 207 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 ZNF181Q2M3W8 571 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 MS4A18Q3C1V0 323 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 GALNTL6Q49A17 601 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 PDCD4Q53EL6 469 aaKnown RBP3.1□□□□□ -1.91
RNF4-211ENST00000509206 PLA1AQ53H76 456 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 RABL3Q5HYI8 236 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 CFAP157Q5JU67 520 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 ZNF678Q5SXM1 525 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 MRPL2Q5T653 305 aaKnown RBP3.1□□□□□ -1.91
RNF4-211ENST00000509206 FAM69AQ5T7M9 428 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 FAM27D1Q5T7N8 215 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 LIPMQ5VYY2 423 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 C1orf94Q6P1W5 598 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 TNFAIP8L2Q6P589 184 aaPredicted RBP3.1□□□□□ -1.91
RNF4-211ENST00000509206 METAP1DQ6UB28 335 aaPredicted RBP3.1□□□□□ -1.91
RNF4-211ENST00000509206 C5orf46Q6UWT4 87 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 Q6ZR03 302 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 RFPL4BQ6ZWI9 263 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 PXKQ7Z7A4 578 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 TMEM219Q86XT9 240 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 FAM90A1Q86YD7 464 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 KRTAP19-1Q8IUB9 90 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 SLC22A9Q8IVM8 553 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 CLEC4FQ8N1N0 589 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 OR10AD1Q8NGE0 317 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 OR52H1Q8NGJ2 320 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 OR5L1Q8NGL2 311 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 OR4A15Q8NGL6 344 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 ADAMTS16Q8TE57 1224 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 LINC00476Q8WZB0 136 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 H1FXQ92522 213 aaKnown RBP3.1□□□□□ -1.91
RNF4-211ENST00000509206 TMEM54Q969K7 222 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 TAAR8Q969N4 342 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 ERGIC1Q969X5 290 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 POM121L2Q96KW2 1035 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 CCDC115Q96NT0 180 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 GPHA2Q96T91 129 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 EPYCQ99645 322 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 CPPED1Q9BRF8 314 aaPredicted RBP3.1□□□□□ -1.91
RNF4-211ENST00000509206 C1orf43Q9BWL3 253 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 C1QTNF3Q9BXJ4 246 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 C11orf54Q9H0W9 315 aaPredicted RBP3.1□□□□□ -1.91
RNF4-211ENST00000509206 SIAEQ9HAT2 523 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 UFSP2Q9NUQ7 469 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 TMEM100Q9NV29 134 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 RNF7Q9UBF6 113 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 SNX24Q9Y343 169 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 TMED5Q9Y3A6 229 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 CHST2Q9Y4C5 530 aa3.1□□□□□ -1.91
RNF4-211ENST00000509206 LOC100509620A0A075B734 347 aa3.09□□□□□ -1.91
RNF4-211ENST00000509206 WDR91A4D1P6 747 aa3.09□□□□□ -1.91
RNF4-211ENST00000509206 OOEPA6NGQ2 149 aa3.09□□□□□ -1.91
RNF4-211ENST00000509206 SEC14L6B5MCN3 397 aa3.09□□□□□ -1.91
RNF4-211ENST00000509206 MCIDASD6RGH6 385 aa3.09□□□□□ -1.91
RNF4-211ENST00000509206 H3BQF6 201 aa3.09□□□□□ -1.91
RNF4-211ENST00000509206 EIF3HO15372 352 aaKnown RBP eCLIP3.09□□□□□ -1.91
RNF4-211ENST00000509206 RNF13O43567 381 aa3.09□□□□□ -1.91
RNF4-211ENST00000509206 CHST1O43916 411 aa3.09□□□□□ -1.91
RNF4-211ENST00000509206 NPIPB7O75200 414 aa3.09□□□□□ -1.91
RNF4-211ENST00000509206 LYPLA1O75608 230 aaPredicted RBP3.09□□□□□ -1.91
RNF4-211ENST00000509206 SEC31AO94979 1220 aaKnown RBP3.09□□□□□ -1.91
RNF4-211ENST00000509206 HPRP00739 348 aa3.09□□□□□ -1.91
RNF4-211ENST00000509206 IGHG1P01857 330 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms