RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 ANKRD29Q8N6D5 301 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 OR9Q1Q8NGQ5 310 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 OR6K3Q8NGY3 331 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 LGALS14Q8TCE9 139 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 EXOSC8Q96B26 276 aaKnown RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF649Q9BS31 505 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 BTBD10Q9BSF8 475 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 RSPO3Q9BXY4 272 aaPredicted RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 C11orf49Q9H6J7 331 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 AGO3Q9H9G7 860 aaKnown RBP3.5□□□□□ -1.85
NEDD4-209ENST00000508871 C1RLQ9NZP8 487 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 ADAM21Q9UKJ8 722 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 AMDHD2Q9Y303 409 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 HES2Q9Y543 173 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 KCTD3Q9Y597 815 aa3.5□□□□□ -1.85
NEDD4-209ENST00000508871 MYLKQ15746 1914 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 DOCK3Q8IZD9 2030 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 A0A096LPI6 279 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 WDR27A2RRH5 827 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 MAP1LC3B2A6NCE7 125 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ALDOBP05062 364 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 LIPCP11150 499 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 OTX1P32242 354 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 PSMD8P48556 350 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 TTPAP49638 278 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 GNG2P59768 71 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 NAA20P61599 178 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ZXDAP98168 799 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ZXDBP98169 803 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 OC90Q02509 493 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 C2orf68Q2NKX9 166 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 RTL4Q6ZR62 310 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ZAR1Q86SH2 424 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ANGPTL5Q86XS5 388 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 SFTPA2Q8IWL1 248 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 MUC15Q8N387 334 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 OR8U1Q8NH10 309 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ACTL9Q8TC94 416 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 GEMIN6Q8WXD5 167 aaKnown RBP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 PELI1Q96FA3 418 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF347Q96SE7 839 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 MAP1LC3BQ9GZQ8 125 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 MARCH5Q9NX47 278 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 DOCK4Q8N1I0 1966 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 F5H768 121 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 I3L4J1 428 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ARL6IP5O75915 188 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 CYB5R3P00387 301 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ARG1P05089 322 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 CD3GP09693 182 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 RPL22P35268 128 aaKnown RBP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 CSNK1A1P48729 337 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 DEFA1P59665 94 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 RBM39Q14498 530 aaKnown RBP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 C18orf21Q32NC0 220 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 OR2T5Q6IEZ7 315 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 FAM166AQ6J272 317 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 H3F3CQ6NXT2 135 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 FAHD1Q6P587 224 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 PAMR1Q6UXH9 720 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 AMIGO2Q86SJ2 522 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 OR4N5Q8IXE1 308 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 SLC22A15Q8IZD6 547 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 OR2T29Q8NH02 315 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ARRDC2Q8TBH0 407 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 DCUN1D4Q92564 292 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF707Q96C28 371 aaPredicted RBP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 SLC22A12Q96S37 553 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF426Q9BUY5 554 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 DERL2Q9GZP9 239 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 COMMD5Q9GZQ3 224 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 CXCL16Q9H2A7 254 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 DNAJC4Q9NNZ3 241 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 B3GNT2Q9NY97 397 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ELOVL5Q9NYP7 299 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 VPS29Q9UBQ0 182 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ANAPC1Q9H1A4 1944 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 SCN8AQ9UQD0 1980 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 MFSD11O43934 449 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 EML2O95834 649 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 TIMP1P01033 207 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 GPX3P22352 226 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 NTF4P34130 210 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ZNF235Q14590 738 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 PARP15Q460N3 678 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 STUMQ69YW2 141 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 ASCL5Q7RTU5 278 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 CALHM1Q8IU99 346 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 RNF113BQ8IZP6 322 aaKnown RBP3.49□□□□□ -1.85
NEDD4-209ENST00000508871 NATD1Q8N6N6 113 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 OR9I1Q8NGQ6 314 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 OR5J2Q8NH18 312 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 OR1S1Q8NH92 325 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 PLPPR1Q8TBJ4 325 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 PHOSPHO2Q8TCD6 241 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 NUDCD2Q8WVJ2 157 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 TMEM230Q96A57 120 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 TMEM121Q9BTD3 319 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 CWH43Q9H720 699 aa3.49□□□□□ -1.85
NEDD4-209ENST00000508871 HRASLSQ9HDD0 168 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms