RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 IL18R1Q13478 541 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 SMCO1Q147U7 214 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 PTGES3Q15185 160 aaKnown RBP3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 TRAM1Q15629 374 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 SLC1A5Q15758 541 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 CCDC58Q4VC31 144 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 TEX30Q5JUR7 227 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 BRMS1LQ5PSV4 323 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 ZNF544Q6NX49 715 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 EPGNQ6UW88 154 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 PHF13Q86YI8 300 aaPredicted RBP3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 CLVS1Q8IUQ0 354 aaPredicted RBP3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 LGI3Q8N145 548 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 PDIK1LQ8N165 341 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 CA13Q8N1Q1 262 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 ATPAF2Q8N5M1 289 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 C12orf29Q8N999 325 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 HSD17B11Q8NBQ5 300 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 OR51D1Q8NGF3 324 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 OR5AR1Q8NGP9 310 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 FAM45AQ8TCE6 357 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 HAVCR2Q8TDQ0 301 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 MRGPRDQ8TDS7 321 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 RASSF5Q8WWW0 418 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 RAB8BQ92930 207 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 TESCQ96BS2 214 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 C2orf48Q96LS8 159 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 TMEM56Q96MV1 263 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 ZNF599Q96NL3 588 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 RCHY1Q96PM5 261 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 SORT1Q99523 831 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 TSNAXQ99598 290 aaKnown RBP3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 GABRG3Q99928 467 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 DDA1Q9BW61 102 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 UGT1A7Q9HAW7 530 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 PLEKHA3Q9HB20 300 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 RHOFQ9HBH0 211 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 ACOT13Q9NPJ3 140 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 PARVAQ9NVD7 372 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 RAB26Q9ULW5 256 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 PPP2R2CQ9Y2T4 447 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 ALG5Q9Y673 324 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 SCRIBQ14160 1630 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 CAMSAP1Q5T5Y3 1602 aa3.54□□□□□ -1.84
SMARCA5-202ENST00000508573 ROCK2O75116 1388 aaKnown RBP3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 A0A1W2PPI3 338 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 MEIOCA2RUB1 952 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 SMIM9A6NGZ8 99 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 ZNF587BE7ETH6 402 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 H7C2Y5 167 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 NME4O00746 187 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 PFDN6O15212 129 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 ATP6V0E1O15342 81 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 SYNGR1O43759 233 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 UGT1A9O60656 530 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 DPM1O60762 260 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 GAGE7O76087 117 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 TBX6O95947 436 aaPredicted RBP3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 CD8AP01732 235 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 TFPTP0C1Z6 253 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 GAGE12FP0CL80 117 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 GAGE12GP0CL81 117 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 GAGE12IP0CL82 117 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 ZNF12P17014 697 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 TBPP20226 339 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 PVALBP20472 110 aaPredicted RBP3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 ATP6V1B2P21281 511 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 GDF1P27539 372 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 CRABP1P29762 137 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 SOX3P41225 446 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 BTDP43251 543 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 UBE2E1P51965 193 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 RPS27AP62979 156 aaKnown RBP3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 GAGE1Q13065 139 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 GAGE4Q13068 117 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 PTGR1Q14914 329 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 KIR2DS3Q14952 304 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 GPRC6AQ5T6X5 926 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 FAM27D1Q5T7N8 215 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 HES5Q5TA89 166 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 TRIQKQ629K1 86 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 TMEM42Q69YG0 159 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 TRIM40Q6P9F5 258 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 FAM131AQ6UXB0 335 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 WDR82Q6UXN9 313 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 TMEM179Q6ZVK1 233 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 TMED4Q7Z7H5 227 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 DPPA2Q7Z7J5 298 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 LHFPL3Q86UP9 236 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 NR2C2APQ86WQ0 139 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 CBLN2Q8IUK8 224 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 SLC22A15Q8IZD6 547 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 KIRREL3Q8IZU9 778 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 ZNF383Q8NA42 475 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 TMEM35BQ8NCS4 154 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 KLHDC9Q8NEP7 349 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 OR2G2Q8NGZ5 317 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 FNDC8Q8TC99 324 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 NEUROG1Q92886 237 aa3.53□□□□□ -1.84
SMARCA5-202ENST00000508573 DNAJC19Q96DA6 116 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms