RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 ABHD13Q7L211 337 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 LRRC8AQ8IWT6 810 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 CATSPER1Q8NEC5 780 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 OR51Q1Q8NH59 317 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 M1APQ8TC57 530 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 C8orf44Q96CB5 159 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 SERPINB12Q96P63 405 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 TECTBQ96PL2 329 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 CYTH2Q99418 400 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 GPR21Q99679 349 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 UTP23Q9BRU9 249 aaKnown RBP3.96□□□□□ -1.78
NIPBL-203ENST00000503274 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 EHD1Q9H4M9 534 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 FBXO6Q9NRD1 293 aaPredicted RBP3.96□□□□□ -1.78
NIPBL-203ENST00000503274 C1orf123Q9NWV4 160 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 STOX2Q9P2F5 926 aaPredicted RBP3.96□□□□□ -1.78
NIPBL-203ENST00000503274 SEC14L3Q9UDX4 400 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 GMPPBQ9Y5P6 360 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 SLC22A7Q9Y694 548 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 NIPBLQ6KC79 2804 aaeCLIP3.96□□□□□ -1.78
NIPBL-203ENST00000503274 OTOGQ6ZRI0 2925 aa3.96□□□□□ -1.78
NIPBL-203ENST00000503274 PDZD2O15018 2839 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 NUP210LQ5VU65 1888 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 IGKV1-8A0A0C4DH67 115 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 KRT87PA6NCN2 255 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 RNF222A6NCQ9 220 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 CCL21O00585 134 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 OR1F1O43749 312 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 ZNF254O75437 659 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 SERPIND1P05546 499 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 CD55P08174 381 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 CPN1P15169 458 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 IMPA1P29218 277 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 SLC1A2P43004 574 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 OR4D2P58180 307 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 TBPL1P62380 186 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 CSNK1G2P78368 415 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 OC90Q02509 493 aaPredicted RBP3.95□□□□□ -1.78
NIPBL-203ENST00000503274 DUPD1Q68J44 220 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 XKRXQ6PP77 449 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 AGTRAPQ6RW13 159 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 CYHR1Q6ZMK1 362 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 TRPM8Q7Z2W7 1104 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 IFNEQ86WN2 208 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 CPNE9Q8IYJ1 553 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 PDIK1LQ8N165 341 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 MFSD9Q8NBP5 474 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 PLPP5Q8NEB5 264 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 OR9A4Q8NGU2 314 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 CD200R1Q8TD46 325 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 ACTRT1Q8TDG2 376 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 EEF1AKMT1Q8WVE0 214 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 PSMF1Q92530 271 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 ANP32BQ92688 251 aaKnown RBP3.95□□□□□ -1.78
NIPBL-203ENST00000503274 MCHR2Q969V1 340 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 LRRC39Q96DD0 335 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 SNF8Q96H20 258 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 IMMP1LQ96LU5 166 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 TMEM237Q96Q45 408 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 AIF1LQ9BQI0 150 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 CAPS2Q9BXY5 557 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 ANKRD17O75179 2603 aaKnown RBP3.95□□□□□ -1.78
NIPBL-203ENST00000503274 MTORP42345 2549 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 SPG11Q96JI7 2443 aa3.95□□□□□ -1.78
NIPBL-203ENST00000503274 GTF3C1Q12789 2109 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 SCN3AQ9NY46 2000 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 CSMD1Q96PZ7 3565 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 RNF103-CHMP3A0A140T963 221 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 SAGE2PA6NJ88 616 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 ZSCAN5BA6NJL1 495 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 DHRS7CA6NNS2 312 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 WASHC1A8K0Z3 465 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 DNALI1O14645 258 aaPredicted RBP3.94□□□□□ -1.78
NIPBL-203ENST00000503274 TRIM3O75382 744 aaPredicted RBP3.94□□□□□ -1.78
NIPBL-203ENST00000503274 ANP32DO95626 131 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 TGFAP01135 160 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 RNH1P13489 461 aaKnown RBP3.94□□□□□ -1.78
NIPBL-203ENST00000503274 COX6B1P14854 86 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 H2AFXP16104 143 aaPredicted RBP3.94□□□□□ -1.78
NIPBL-203ENST00000503274 TCP1P17987 556 aaKnown RBP3.94□□□□□ -1.78
NIPBL-203ENST00000503274 IL1RNP18510 177 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 RPL4P36578 427 aaKnown RBP3.94□□□□□ -1.78
NIPBL-203ENST00000503274 MAGEA3P43357 314 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 CYB561P49447 251 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 HNMTP50135 292 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 RND3P61587 244 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 STXBP1P61764 594 aaKnown RBP3.94□□□□□ -1.78
NIPBL-203ENST00000503274 TGM3Q08188 693 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 ZNF154Q13106 437 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 EXOSC2Q13868 293 aaKnown RBP3.94□□□□□ -1.78
NIPBL-203ENST00000503274 SFT2D3Q587I9 215 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 OR2B11Q5JQS5 317 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 ANKRD22Q5VYY1 191 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 OR5M10Q6IEU7 315 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 SLC25A25Q6KCM7 469 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 FAM45BPQ6NSW5 357 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 H3F3CQ6NXT2 135 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 FRA10AC1Q70Z53 315 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 ANKRD37Q7Z713 158 aa3.94□□□□□ -1.78
NIPBL-203ENST00000503274 SLC26A11Q86WA9 606 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms