RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 B3GLCTQ6Y288 498 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 PIWIL3Q7Z3Z3 882 aaKnown RBP3.27□□□□□ -1.89
USP54-217ENST00000498213 SZRD1Q7Z422 152 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 ZER1Q7Z7L7 766 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 CROCCP2Q86T23 111 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 TMCO5AQ8N6Q1 288 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 CCNYL1Q8N7R7 359 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 LSMEM1Q8N8F7 131 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 SCCPDHQ8NBX0 429 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 OR9K2Q8NGE7 335 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 OR5M1Q8NGP8 315 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 OR1K1Q8NGR3 316 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 OR1J2Q8NGS2 313 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 OR52N5Q8NH56 324 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 DOK4Q8TEW6 326 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 GATAD1Q8WUU5 269 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 BCL2L2Q92843 193 aaPredicted RBP3.27□□□□□ -1.89
USP54-217ENST00000498213 POP5Q969H6 163 aaKnown RBP3.27□□□□□ -1.89
USP54-217ENST00000498213 TMEM19Q96HH6 336 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 SH3YL1Q96HL8 342 aaPredicted RBP3.27□□□□□ -1.89
USP54-217ENST00000498213 ATP6V1G3Q96LB4 118 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 MAGEB18Q96M61 343 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 TSSK3Q96PN8 268 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 OR7D2Q96RA2 312 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 ZNF300Q96RE9 604 aaPredicted RBP3.27□□□□□ -1.89
USP54-217ENST00000498213 THUMPD3Q9BV44 507 aaKnown RBP3.27□□□□□ -1.89
USP54-217ENST00000498213 EBPLQ9BY08 206 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 BCL2L14Q9BZR8 327 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 LRMDAQ9H2I8 198 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 RAD21L1Q9H4I0 556 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 NARFLQ9H6Q4 476 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 TMEM185BQ9H7F4 350 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 ANKRA2Q9H9E1 313 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 BEX1Q9HBH7 125 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 DYNLRB1Q9NP97 96 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 MED4Q9NPJ6 270 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 SLC7A10Q9NS82 523 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 FLRT3Q9NZU0 649 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 LGALS13Q9UHV8 139 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 BTNL2Q9UIR0 455 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 TIMM22Q9Y584 194 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 GMEB1Q9Y692 573 aa3.27□□□□□ -1.89
USP54-217ENST00000498213 IGLV3-9A0A075B6K5 115 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 TMED7-TICAM2A0A0A6YYA0 188 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 IGHV1-18A0A0C4DH31 117 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 RNF103-CHMP3A0A140T963 221 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 A0A1W2PPM1 405 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 PRORSD1PA6NEY8 169 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 hCG_2039718K7EN88 272 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 COPEO14579 308 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 AIM2O14862 343 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 CFLARO15519 480 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 XPNPEP2O43895 674 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 FMO6PO60774 539 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 BCAS1O75363 584 aaPredicted RBP3.26□□□□□ -1.89
USP54-217ENST00000498213 FOXH1O75593 365 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 FARS2O95363 451 aaKnown RBP3.26□□□□□ -1.89
USP54-217ENST00000498213 AHSA1O95433 338 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 MT-ATP6P00846 226 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 OPN1MWP04001 364 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 IL6P05231 212 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 CECR9P0C854 216 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 UBTFL6P0CB48 400 aaPredicted RBP3.26□□□□□ -1.89
USP54-217ENST00000498213 OPN1MW2P0DN77 364 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 OPN1MW3P0DN78 364 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 SAGP10523 405 aaPredicted RBP3.26□□□□□ -1.89
USP54-217ENST00000498213 ETS2P15036 469 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 IL7RP16871 459 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 GTF2E2P29084 291 aaKnown RBP3.26□□□□□ -1.89
USP54-217ENST00000498213 SHC1P29353 583 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 CRYBB2P43320 205 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 RAD52P43351 418 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 GPR6P46095 362 aaPredicted RBP3.26□□□□□ -1.89
USP54-217ENST00000498213 CCR4P51679 360 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 CRISP3P54108 245 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 OR2B6P58173 313 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 HBA1P69905 142 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 GALK2Q01415 458 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 IFFO1Q0D2I5 559 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 EPS8Q12929 822 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 FADDQ13158 208 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 GSG1Q2KHT4 349 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 C2orf68Q2NKX9 166 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 HFEQ30201 348 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 TRMT5Q32P41 509 aaKnown RBP3.26□□□□□ -1.89
USP54-217ENST00000498213 UGT3A2Q3SY77 523 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 C6orf136Q5SQH8 315 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 FAM69AQ5T7M9 428 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 TSPO2Q5TGU0 170 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 FAM180BQ6P0A1 224 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 WDR73Q6P4I2 378 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 C11orf88Q6PI97 169 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 C6orf120Q7Z4R8 191 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 PXKQ7Z7A4 578 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 GPR137CQ8N3F9 429 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 SPICQ8N5J4 248 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 TMEM86BQ8N661 226 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 ZNF614Q8N883 585 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 GATSQ8NAP1 163 aa3.26□□□□□ -1.89
USP54-217ENST00000498213 FNDC5Q8NAU1 212 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms