RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 COLCA1Q6ZS62 124 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 SHFQ7M4L6 423 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 DCXRQ7Z4W1 244 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 AMIGO2Q86SJ2 522 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZNF511Q8NB15 262 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 MAPK1IP1LQ8NDC0 245 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 OR10S1Q8NGN2 331 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 PTP4A1Q93096 173 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 SLAMF6Q96DU3 332 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZNF799Q96GE5 643 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 C1QTNF5Q9BXJ0 243 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 BPESC1Q9GZL8 116 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 POFUT1Q9H488 388 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 MED20Q9H944 212 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 SAP30LQ9HAJ7 183 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 DECR2Q9NUI1 292 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 PURGQ9UJV8 347 aaKnown RBP9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZDHHC8Q9ULC8 765 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 OAZ3Q9UMX2 235 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 STARD10Q9Y365 291 aa9.09□□□□□ -0.95
CDC42SE1-206ENST00000492796 ZFHX3Q15911 3703 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 ZSCAN5BA6NJL1 495 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 ZAR1LA6NP61 321 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 ZNF878C9JN71 531 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 F5H5K5 113 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 CD5LO43866 347 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 IGHV1-46P01743 117 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 CD55P08174 381 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 PSKH1P11801 424 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 SELEP16581 610 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 MAGEB1P43366 347 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 SLC15A1P46059 708 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 GRB2P62993 217 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 CCL8P80075 99 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 PPP2R2BQ00005 443 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 KRTAP1-1Q07627 177 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 MALLQ13021 153 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 RIN1Q13671 783 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 GGTLC2Q14390 218 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 SNAPC1Q16533 368 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 RSPO1Q2MKA7 263 aaPredicted RBP9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 TMEM249Q2WGJ8 235 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 LCN1P1Q5VSP4 162 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 SLX4IPQ5VYV7 408 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 TMEM236Q5W0B7 351 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 DRAM2Q6UX65 266 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 RHOUQ7L0Q8 258 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 CXXC5Q7LFL8 322 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 DPY19L4Q7Z388 723 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 ERI1Q8IV48 349 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 CPOQ8IVL8 374 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 TIGD4Q8IY51 512 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 OR6N2Q8NGY6 317 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 ST7LQ8TDW4 575 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 HAVCR1Q96D42 359 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 CMBLQ96DG6 245 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 RBM4BQ9BQ04 359 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 COPS4Q9BT78 406 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 EGLN1Q9GZT9 426 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 OR51V1Q9H2C8 321 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 SEMA6AQ9H2E6 1030 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 TOR3AQ9H497 397 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 PTTG3PQ9NZH4 202 aa9.08□□□□□ -0.96
CDC42SE1-206ENST00000492796 TANC2Q9HCD6 1990 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 H3BNX3 289 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 TPD52L2O43399 206 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 SPRY3O43610 288 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 TLX2O43763 284 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 MITFO75030 526 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 APOC1P02654 83 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 LCATP04180 440 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 TACSTD2P09758 323 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 SLC2A5P22732 501 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 TNFSF4P23510 183 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 CRYBB2P43320 205 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 SLC6A9P48067 706 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 CHN2P52757 468 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 TMEM33P57088 247 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 RPS7P62081 194 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 EIF2B1Q14232 305 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 TAF13Q15543 124 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 KLHL12Q53G59 568 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 Q71RC1 249 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 ZNF454Q8N9F8 522 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 RNF133Q8WVZ7 376 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 GTF3AQ92664 365 aaKnown RBP9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 ZMYND19Q96E35 227 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 ELMOD3Q96FG2 381 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 KCNJ15Q99712 375 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 CIB1Q99828 191 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 GABARAPL3Q9BY60 117 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 OPA3Q9H6K4 179 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 MSL2Q9HCI7 577 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 TVP23BQ9NYZ1 205 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 TMEFF2Q9UIK5 374 aaPredicted RBP9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 MTORP42345 2549 aa9.07□□□□□ -0.96
CDC42SE1-206ENST00000492796 IGHV4-61A0A0C4DH41 118 aa9.06□□□□□ -0.96
CDC42SE1-206ENST00000492796 IGHV1-69-2A0A0G2JMI3 117 aa9.06□□□□□ -0.96
CDC42SE1-206ENST00000492796 SAC3D1A6NKF1 404 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms