RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 PSIP1O75475 530 aaKnown RBP3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 RPP14O95059 124 aaKnown RBP3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 TNFAIP8O95379 198 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 RHOCP08134 193 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 ZNF32P17041 273 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 MAGP20916 626 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 TEAD1P28347 426 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 IL12AP29459 219 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 RBM34P42696 430 aaKnown RBP3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 CDKN2CP42773 168 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 MAGEA2P43356 314 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 MAGEA6P43360 314 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 RANBP1P43487 201 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 YAP1P46937 504 aaKnown RBP3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 DNASE1L1P49184 302 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 GDI2P50395 445 aaKnown RBP3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 CEBPGP53567 150 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 MAGOHP61326 146 aaKnown RBP3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR5I1Q13606 314 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 OXA1LQ15070 435 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR4D1Q15615 310 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 NRF1Q16656 503 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 DGUOKQ16854 277 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 KCTD19Q17RG1 926 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 KLF17Q5JT82 389 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 ADNP2Q6IQ32 1131 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 ABHD13Q7L211 337 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 EID2Q8N6I1 236 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 CDRT4Q8N9R6 151 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 CATSPER1Q8NEC5 780 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR1S2Q8NGQ3 325 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR6K2Q8NGY2 324 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 OR2L8Q8NGY9 312 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 ACER1Q8TDN7 264 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 CENPNQ96H22 339 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 ITCHQ96J02 903 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 DNAJC1Q96KC8 554 aaKnown RBP3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 TBX15Q96SF7 602 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 ZNF670Q9BS34 389 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 TIMM29Q9BSF4 260 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 NEUROG2Q9H2A3 272 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 ARMC7Q9H6L4 198 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 METTL8Q9H825 291 aaKnown RBP3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 PATZ1Q9HBE1 687 aaKnown RBP3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 SIRT7Q9NRC8 400 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 MCUBQ9NWR8 336 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 HRASLS2Q9NWW9 162 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 THUMPD1Q9NXG2 353 aaKnown RBP3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 ZNF223Q9UK11 482 aaPredicted RBP3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 NEUROG3Q9Y4Z2 214 aa3.16□□□□□ -1.9
HMGB1P38-201ENST00000490557 GOLGA6L10A6NI86 522 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 H0YHG0 523 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 GOLGA6L19H0YKK7 550 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 DCTN6O00399 190 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 AQP9O43315 295 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 HCRTR1O43613 425 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 BRI3O95415 125 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 CLIC3O95833 236 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 FGGP02679 453 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 C2P06681 752 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 KLK3P07288 261 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 SERPINA6P08185 405 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 RPSAP08865 295 aaKnown RBP3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 SMIM10L1P0DMW3 83 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 MLNP12872 115 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 CTRB1P17538 263 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 CEACAM3P40198 252 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 NBL1P41271 181 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 GLP1RP43220 463 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 RPS10P46783 165 aaKnown RBP3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 CSNK1A1P48729 337 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 CLDN6P56747 220 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 FBXW4P57775 412 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 CASP8Q14790 479 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 ATP6V1FQ16864 119 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 EXOC3L4Q17RC7 722 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 GOLGA7BQ2TAP0 167 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 TRMT5Q32P41 509 aaKnown RBP3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 COQ5Q5HYK3 327 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 C1orf100Q5SVJ3 147 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 CLVS2Q5SYC1 327 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 CTRB2Q6GPI1 263 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR52E8Q6IFG1 317 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 KRTAP5-1Q6L8H4 278 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 Q6P435 159 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 Q6ZN92 141 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 UNC93AQ86WB7 457 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 FUNDC1Q8IVP5 155 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 NKAPP1Q8N9T2 125 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR5B3Q8NH48 314 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 OR5K2Q8NHB8 316 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 PYROXD1Q8WU10 500 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 PHF10Q8WUB8 498 aaKnown RBP3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 BAALCQ8WXS3 180 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 FGF11Q92914 225 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 SMIM10Q96HG1 83 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 HSFY1Q96LI6 401 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 MICU1Q9BPX6 476 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 COPS4Q9BT78 406 aa3.15□□□□□ -1.91
HMGB1P38-201ENST00000490557 TMEM59Q9BXS4 323 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms