RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 TSPAN11A1L157 253 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 FAM47DPA6NHR8 397 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 SUPT3HB4E1H0 165 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 E9PBE3 544 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 SPECC1L-ADORA2AF8WAN1 911 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 G3V4G9 280 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 NDUFAB1O14561 156 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 RS1O15537 224 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 NIPSNAP2O75323 286 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 MTX2O75431 263 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 SUPT3HO75486 399 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 SCGB2A1O75556 95 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 SRP72O76094 671 aaKnown RBP2.35□□□□□ -2.03
LINC00888-204ENST00000487386 RHOBTB1O94844 696 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 TRBC1P01850 177 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 CTSLP07711 333 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 SNRPAP09012 282 aaKnown RBP2.35□□□□□ -2.03
LINC00888-204ENST00000487386 RBMY1CP0DJD4 496 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 ZNF30P17039 623 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 GCAP28676 217 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 FOXN2P32314 431 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 OPRD1P41143 372 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 KIR2DS4P43632 304 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 STC1P52823 247 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 CRISP3P54108 245 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 RAB10P61026 200 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 ELP6Q0PNE2 266 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 DNAJC3Q13217 504 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 CYTH1Q15438 398 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 TAF1AQ15573 450 aaPredicted RBP2.35□□□□□ -2.03
LINC00888-204ENST00000487386 HNRNPA1L2Q32P51 320 aaKnown RBP2.35□□□□□ -2.03
LINC00888-204ENST00000487386 CARD16Q5EG05 197 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 GPRC6AQ5T6X5 926 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 N4BP2L1Q5TBK1 243 aaPredicted RBP2.35□□□□□ -2.03
LINC00888-204ENST00000487386 HHATQ5VTY9 493 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 PTRHD1Q6GMV3 140 aaKnown RBP2.35□□□□□ -2.03
LINC00888-204ENST00000487386 Q6ZS52 159 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 ZCCHC23Q6ZST2 131 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 C3orf62Q6ZUJ4 267 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 GDPD3Q7L5L3 318 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 TAS2R42Q7RTR8 314 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 TRAPPC5Q8IUR0 188 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 MMAAQ8IVH4 418 aaKnown RBP2.35□□□□□ -2.03
LINC00888-204ENST00000487386 STK40Q8N2I9 435 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 DEFB123Q8N688 67 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 CATSPER1Q8NEC5 780 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 NPBQ8NG41 125 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 OR10G3Q8NGC4 313 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 OR4K2Q8NGD2 314 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 AGR3Q8TD06 166 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 LKAAEAR1Q8TD35 194 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 CXorf40AQ8TE69 158 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 NAT14Q8WUY8 206 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 KCTD4Q8WVF5 259 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 SKA2Q8WVK7 121 aaPredicted RBP2.35□□□□□ -2.03
LINC00888-204ENST00000487386 ST8SIA1Q92185 356 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 MSANTD3Q96H12 275 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 TIMD4Q96H15 378 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 GPR22Q99680 433 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 P2RY13Q9BPV8 354 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 KIFC1Q9BW19 673 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 CAPS2Q9BXY5 557 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 ROPN1BQ9BZX4 212 aaPredicted RBP2.35□□□□□ -2.03
LINC00888-204ENST00000487386 C20orf85Q9H1P6 137 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 PRO3102Q9H379 93 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 MFSD1Q9H3U5 465 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 MEAF6Q9HAF1 191 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 CHRAC1Q9NRG0 131 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 HEBP1Q9NRV9 189 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 TREX1Q9NSU2 369 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 EURLQ9NYK6 297 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 EPS15L1Q9UBC2 864 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 GNG12Q9UBI6 72 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 MARCOQ9UEW3 520 aaPredicted RBP2.35□□□□□ -2.03
LINC00888-204ENST00000487386 NUFIP1Q9UHK0 495 aaKnown RBP2.35□□□□□ -2.03
LINC00888-204ENST00000487386 CD84Q9UIB8 345 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 PHF11Q9UIL8 331 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 FBXO5Q9UKT4 447 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 RASD1Q9Y272 281 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 OR51B4Q9Y5P0 310 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 V9GY05 133 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 CHD9Q3L8U1 2897 aa2.35□□□□□ -2.03
LINC00888-204ENST00000487386 LRP4O75096 1905 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 MYO18AQ92614 2054 aaKnown RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 IGHV1OR21-1A0A087WYE8 117 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 A0A087WZY1 265 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 LOC285095A0A1B0GVY8 99 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 NCF1BA6NI72 391 aaPredicted RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 A6NIZ1 184 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 OR2AG2A6NM03 316 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 NCF1CA8MVU1 366 aaPredicted RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 NPIPA7E9PJI5 369 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 TPST2O60704 377 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 SHOX2O60902 331 aaPredicted RBP2.34□□□□□ -2.03
LINC00888-204ENST00000487386 KIAA0754O94854 1291 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 CD160O95971 181 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 C1QAP02745 245 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 SLC35E2BP0CK96 405 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 NPIPA8P0DM63 369 aa2.34□□□□□ -2.03
LINC00888-204ENST00000487386 TROVE2P10155 538 aaKnown RBP eCLIP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms