RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ARL9Q6T311 187 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 PATL1Q86TB9 770 aaKnown RBP4.95□□□□□ -1.62
CSDE1-207ENST00000483407 FUNDC1Q8IVP5 155 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 SLC30A8Q8IWU4 369 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 ZNF101Q8IZC7 436 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 LRRC17Q8N6Y2 441 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 SIGLECL1Q8N7X8 197 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 AKR7LQ8NHP1 331 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 VANGL1Q8TAA9 524 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-207ENST00000483407 SLC25A40Q8TBP6 338 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 FNDC8Q8TC99 324 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 KLF14Q8TD94 323 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-207ENST00000483407 RASSF5Q8WWW0 418 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 ASB10Q8WXI3 467 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 GTF3AQ92664 365 aaKnown RBP4.95□□□□□ -1.62
CSDE1-207ENST00000483407 DVL3Q92997 716 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-207ENST00000483407 SLC25A28Q96A46 364 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 POM121L2Q96KW2 1035 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 C7orf26Q96N11 449 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 CCDC28BQ9BUN5 200 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 ZNF426Q9BUY5 554 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 MRPL13Q9BYD1 178 aaKnown RBP4.95□□□□□ -1.62
CSDE1-207ENST00000483407 OR2J1Q9GZK6 312 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 RABEP2Q9H5N1 569 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 IKZF5Q9H5V7 419 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 UNKLQ9H9P5 680 aaKnown RBP4.95□□□□□ -1.62
CSDE1-207ENST00000483407 ELOVL3Q9HB03 270 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 INIPQ9NRY2 104 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 LEF1Q9UJU2 399 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-207ENST00000483407 PURGQ9UJV8 347 aaKnown RBP4.95□□□□□ -1.62
CSDE1-207ENST00000483407 NDRG4Q9ULP0 352 aaKnown RBP4.95□□□□□ -1.62
CSDE1-207ENST00000483407 NPTNQ9Y639 398 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 AUP1Q9Y679 476 aa4.95□□□□□ -1.62
CSDE1-207ENST00000483407 CLDN34H7C241 214 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 ANGPT2O15123 496 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 SURF4O15260 269 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 TIMM8AO60220 97 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-207ENST00000483407 OR7A10O76100 309 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 ZFPL1O95159 310 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 LYPD3O95274 346 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 SLC2A10O95528 541 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 IGHV2-70P01814 119 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 IGHMP01871 453 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 MT-ND1P03886 318 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 THY1P04216 161 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 CD55P08174 381 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 ZNF12P17014 697 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 ZNF32P17041 273 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 TNFRSF1AP19438 455 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 FUT1P19526 365 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 GSTM3P21266 225 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 ZFP36P26651 326 aaKnown RBP4.94□□□□□ -1.62
CSDE1-207ENST00000483407 CDAP32320 146 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 MPV17P39210 176 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 WNT5AP41221 380 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 RBM34P42696 430 aaKnown RBP4.94□□□□□ -1.62
CSDE1-207ENST00000483407 MTNR1AP48039 350 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 ZNF133P52736 654 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-207ENST00000483407 UGT2B15P54855 530 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 PCBD1P61457 104 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 RPS7P62081 194 aaKnown RBP4.94□□□□□ -1.62
CSDE1-207ENST00000483407 ERVK-25P63136 954 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 TNFAIP6P98066 277 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-207ENST00000483407 PSG4Q00888 419 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 DEFA6Q01524 100 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 RPL18Q07020 188 aaKnown RBP4.94□□□□□ -1.62
CSDE1-207ENST00000483407 ZNF154Q13106 437 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 SGCAQ16586 387 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 TMEM155Q4W5P6 130 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 PDLIM3Q53GG5 364 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-207ENST00000483407 ESCO2Q56NI9 601 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 RUNDC3AQ59EK9 446 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 MTX3Q5HYI7 312 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 BTNL3Q6UXE8 466 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 DHDDSQ86SQ9 333 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 PTOV1Q86YD1 416 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 RBM45Q8IUH3 476 aaKnown RBP4.94□□□□□ -1.62
CSDE1-207ENST00000483407 DEFB108BQ8NET1 73 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 GPR32P1Q8NGA4 272 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 LRRC8CQ8TDW0 803 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 GEMIN6Q8WXD5 167 aaKnown RBP4.94□□□□□ -1.62
CSDE1-207ENST00000483407 NSMAFQ92636 917 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 LRRC58Q96CX6 371 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 SGTBQ96EQ0 304 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 C4orf45Q96LM5 186 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 DUX5Q96PT3 197 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 RBP7Q96R05 134 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 SEPHS2Q99611 448 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 CGREF1Q99674 301 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 ALG12Q9BV10 488 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 SLC25A32Q9H2D1 315 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 NANOGQ9H9S0 305 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 PATZ1Q9HBE1 687 aaKnown RBP4.94□□□□□ -1.62
CSDE1-207ENST00000483407 TMEM106BQ9NUM4 274 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 OR5V1Q9UGF6 321 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 RAB21Q9UL25 225 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 NDUFAF1Q9Y375 327 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 TIMM10BQ9Y5J6 103 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 INSIG2Q9Y5U4 225 aa4.94□□□□□ -1.62
CSDE1-207ENST00000483407 RYR3Q15413 4870 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms