RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 SLC7A7Q9UM01 511 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 SAR1BQ9Y6B6 198 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 SPEF2Q9C093 1822 aa3.47□□□□□ -1.85
VPS41-212ENST00000482217 IGLV5-37A0A075B6J1 123 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 CENPVL3A0A0U1RRI6 287 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 LRIT2A6NDA9 550 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 GJE1A6NN92 205 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 DHRS7CA6NNS2 312 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 PP2D1A8MPX8 630 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 HACD1B0YJ81 288 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 PRR32B1ATL7 298 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 OR11H12B2RN74 326 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 FCN1O00602 326 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 PFDN1O60925 122 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 RP2O75695 350 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 PTTG1O95997 202 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 ATP1B1P05026 303 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 GSTA1P08263 222 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 GABRG2P18507 467 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 CELP19835 753 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 SERPINB5P36952 375 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 TTPAP49638 278 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 HOXA1P49639 335 aaPredicted RBP3.46□□□□□ -1.86
VPS41-212ENST00000482217 PPOXP50336 477 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 RAB7AP51149 207 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 CCR6P51684 374 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 PDX1P52945 283 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 PAX9P55771 341 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 TCL1AP56279 114 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 OR1D5P58170 312 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 RAB40BQ12829 278 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 SLC39A6Q13433 755 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 GTF2H2Q13888 395 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 LAGE3Q14657 143 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 PSMD5Q16401 504 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 DEFB115Q30KQ5 88 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 VWA2Q5GFL6 755 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 RPL13AP3Q6NVV1 102 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 GTF2H2CQ6P1K8 395 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 CMC1Q7Z7K0 106 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 CCDC71Q8IV32 467 aaPredicted RBP3.46□□□□□ -1.86
VPS41-212ENST00000482217 STX19Q8N4C7 294 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 METTL13Q8N6R0 699 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 OR2T12Q8NG77 320 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 OR11H1Q8NG94 326 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 GPR32P1Q8NGA4 272 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 OR8J3Q8NGG0 315 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 OR4D10Q8NGI6 311 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 OR11H2Q8NH07 326 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 THAP6Q8TBB0 222 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 C16orf78Q8WTQ4 265 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 CASTOR1Q8WTX7 329 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 TMEM234Q8WY98 164 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 YIPF5Q969M3 257 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 TAMM41Q96BW9 452 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 MRPL48Q96GC5 212 aaKnown RBP3.46□□□□□ -1.86
VPS41-212ENST00000482217 LYZL4Q96KX0 146 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 C2orf88Q9BSF0 95 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 MED18Q9BUE0 208 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 TMEM59Q9BXS4 323 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 NXF2Q9GZY0 626 aaKnown RBP3.46□□□□□ -1.86
VPS41-212ENST00000482217 RNF41Q9H4P4 317 aaPredicted RBP3.46□□□□□ -1.86
VPS41-212ENST00000482217 NHEJ1Q9H9Q4 299 aaPredicted RBP3.46□□□□□ -1.86
VPS41-212ENST00000482217 SH2D2AQ9NP31 389 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 TIGARQ9NQ88 270 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 MCUBQ9NWR8 336 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 HRASLS2Q9NWW9 162 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 GLTPQ9NZD2 209 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 IL17CQ9P0M4 197 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 THAP10Q9P2Z0 257 aaPredicted RBP3.46□□□□□ -1.86
VPS41-212ENST00000482217 Q9UF83 564 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 OR52A1Q9UKL2 312 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 FBXO5Q9UKT4 447 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 KCNS2Q9ULS6 477 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 HHLA2Q9UM44 414 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 EXOSC1Q9Y3B2 195 aaKnown RBP3.46□□□□□ -1.86
VPS41-212ENST00000482217 OARD1Q9Y530 152 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 SYNJ2O15056 1496 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 BICRAQ9NZM4 1560 aa3.46□□□□□ -1.86
VPS41-212ENST00000482217 PDS5AQ29RF7 1337 aaKnown RBP3.45□□□□□ -1.86
VPS41-212ENST00000482217 A0A1B0GTH9 108 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 METTL15A6NJ78 407 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 ZNF878C9JN71 531 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 PPIHO43447 177 aaKnown RBP3.45□□□□□ -1.86
VPS41-212ENST00000482217 CA11O75493 328 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 NTN1O95631 604 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 HBE1P02100 147 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 MT-ND4P03905 459 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 ALPLP05186 524 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 HPNP05981 417 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 H1F0P07305 194 aaKnown RBP3.45□□□□□ -1.86
VPS41-212ENST00000482217 FAM228BP0C875 321 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 SCGB1A1P11684 91 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 DAOP14920 347 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 CD1EP15812 388 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 IGFBP3P17936 291 aaPredicted RBP3.45□□□□□ -1.86
VPS41-212ENST00000482217 TCP1P17987 556 aaKnown RBP3.45□□□□□ -1.86
VPS41-212ENST00000482217 PVALBP20472 110 aaPredicted RBP3.45□□□□□ -1.86
VPS41-212ENST00000482217 EDNRAP25101 427 aa3.45□□□□□ -1.86
VPS41-212ENST00000482217 CDKN2AP42771 156 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms