RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 STUB1Q9UNE7 303 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 SSR3Q9UNL2 185 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 GSTK1Q9Y2Q3 226 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 ZNF281Q9Y2X9 895 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 POLEQ07864 2286 aa8.87□□□□□ -0.99
USP39-215ENST00000481409 DSPP15924 2871 aaKnown RBP8.87□□□□□ -0.99
USP39-215ENST00000481409 SPTA1P02549 2419 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 A0A096LPE4 126 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 TRDV1A0A1B0GX56 115 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 A0A1W2PPZ6 126 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 PRR32B1ATL7 298 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 M0R135 149 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 SLC22A1O15245 554 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 LYZL6O75951 148 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 LALBAP00709 142 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 IGKV3-15P01624 115 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 RAF1P04049 648 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 CFL1P23528 166 aaKnown RBP8.86□□□□□ -0.99
USP39-215ENST00000481409 STOMP27105 288 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 APLNRP35414 380 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 TGFBR2P37173 567 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 HTR5AP47898 357 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 CX3CR1P49238 355 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 GDI2P50395 445 aaKnown RBP8.86□□□□□ -0.99
USP39-215ENST00000481409 FOXG1P55316 489 aaPredicted RBP8.86□□□□□ -0.99
USP39-215ENST00000481409 SORDQ00796 357 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 SSX1Q16384 188 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 TBC1D28Q2M2D7 210 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 BCL2L15Q5TBC7 163 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 C9orf135Q5VTT2 229 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 LIPKQ5VXJ0 399 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 LUZP2Q86TE4 346 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 ELMOD2Q8IZ81 293 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 ZNF283Q8N7M2 679 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 RELL2Q8NC24 303 aaPredicted RBP8.86□□□□□ -0.99
USP39-215ENST00000481409 TMIGD2Q96BF3 282 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 C10orf35Q96D05 121 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 ZNF799Q96GE5 643 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 PGLYRP3Q96LB9 341 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 ZNF75AQ96N20 296 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 RBM38Q9H0Z9 239 aaKnown RBP8.86□□□□□ -0.99
USP39-215ENST00000481409 FRRS1LQ9P0K9 344 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 RSL24D1Q9UHA3 163 aaKnown RBP8.86□□□□□ -0.99
USP39-215ENST00000481409 OR52A1Q9UKL2 312 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 SF3B6Q9Y3B4 125 aaKnown RBP8.86□□□□□ -0.99
USP39-215ENST00000481409 CEPT1Q9Y6K0 416 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 ZZEF1O43149 2961 aa8.86□□□□□ -0.99
USP39-215ENST00000481409 BOD1L1Q8NFC6 3051 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 CACNA1BQ00975 2339 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 LOC390937A0A1W2PQ73 354 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 OR4C45A6NMZ5 311 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 DHRS7CA6NNS2 312 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 E9PI62 339 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 PSMD9O00233 223 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 XRCC2O43543 280 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 AIREO43918 545 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 TMEM127O75204 238 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 MTRF1O75570 445 aaKnown RBP8.85□□□□□ -0.99
USP39-215ENST00000481409 SC5DO75845 299 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 ARL6IP5O75915 188 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 RGS9O75916 674 aaPredicted RBP8.85□□□□□ -0.99
USP39-215ENST00000481409 RPP14O95059 124 aaKnown RBP8.85□□□□□ -0.99
USP39-215ENST00000481409 IGLV1-44P01699 117 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 HLA-HP01893 362 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 ACSM4P0C7M7 580 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 ZNF14P17017 642 aaPredicted RBP8.85□□□□□ -0.99
USP39-215ENST00000481409 ACHEP22303 614 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 PCSK6P29122 969 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 UGT2B10P36537 528 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 RANBP1P43487 201 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 HIKESHIQ53FT3 197 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 WDR38Q5JTN6 314 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 GPR107Q5VW38 600 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 ZNF774Q6NX45 483 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 COLCA1Q6ZS62 124 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 PRSS45Q7RTY3 260 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 CLVS1Q8IUQ0 354 aaPredicted RBP8.85□□□□□ -0.99
USP39-215ENST00000481409 ZNF676Q8N7Q3 588 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 WDR31Q8NA23 367 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 OR5L1Q8NGL2 311 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 GPR148Q8TDV2 347 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 CA5BP1Q8WTZ4 195 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 GHSRQ92847 366 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 RNASE6Q93091 150 aaKnown RBP8.85□□□□□ -0.99
USP39-215ENST00000481409 CCDC120Q96HB5 630 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 POM121L2Q96KW2 1035 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 C1QTNF5Q9BXJ0 243 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 TTTY10Q9BZA0 68 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 PBOV1Q9GZY1 135 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 OR10A2Q9H208 303 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 NGBQ9NPG2 151 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 G6PC2Q9NQR9 355 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 TBCCD1Q9NVR7 557 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 HHLA2Q9UM44 414 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 SLC25A15Q9Y619 301 aa8.85□□□□□ -0.99
USP39-215ENST00000481409 USP24Q9UPU5 2620 aa8.84□□□□□ -0.99
USP39-215ENST00000481409 ZNF879B4DU55 563 aa8.84□□□□□ -0.99
USP39-215ENST00000481409 F5H5K5 113 aa8.84□□□□□ -0.99
USP39-215ENST00000481409 MAGEB4O15481 346 aaPredicted RBP8.84□□□□□ -0.99
USP39-215ENST00000481409 LRRTM2O43300 516 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms