RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 PPP1CBP62140 327 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 SNRPD2P62316 118 aaKnown RBP16.96■□□□□ 0.31
LIME1-205ENST00000480139 MBNL2Q5VZF2 373 aaKnown RBP16.96■□□□□ 0.31
LIME1-205ENST00000480139 DRAM2Q6UX65 266 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 LRRC75A-AS1Q8N1F1 130 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 SETD9Q8NE22 299 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 OR51G2Q8NGK0 314 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 ASB17Q8WXJ9 295 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 ZNF799Q96GE5 643 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 MARS2Q96GW9 593 aaKnown RBP16.96■□□□□ 0.31
LIME1-205ENST00000480139 MRPL37Q9BZE1 423 aaKnown RBP16.96■□□□□ 0.31
LIME1-205ENST00000480139 OR51B6Q9H340 312 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 CENPMQ9NSP4 180 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 CLN6Q9NWW5 311 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 KLHDC2Q9Y2U9 406 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 HSPE1-MOB4S4R3N1 261 aa16.96■□□□□ 0.31
LIME1-205ENST00000480139 TEX15Q9BXT5 2789 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 TMEM129A0AVI4 362 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 H7C417 338 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 APOC1P02654 83 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 MTNR1AP48039 350 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 ERVS71-1P61550 626 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 TAF13Q15543 124 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 ZNF718Q3SXZ3 478 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 KCTD18Q6PI47 426 aaPredicted RBP16.95■□□□□ 0.3
LIME1-205ENST00000480139 DEGS2Q6QHC5 323 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 SLC35F2Q8IXU6 374 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 OR5L1Q8NGL2 311 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 SYNPRQ8TBG9 265 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 SLC25A40Q8TBP6 338 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 THEM6Q8WUY1 208 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 DOK1Q99704 481 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 FOXC2Q99958 501 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 GSX2Q9BZM3 304 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 PMF1-BGLAPU3KQ54 211 aa16.95■□□□□ 0.3
LIME1-205ENST00000480139 IGHV3-13P01766 116 aa16.94■□□□□ 0.3
LIME1-205ENST00000480139 H2BFMP0C1H6 154 aa16.94■□□□□ 0.3
LIME1-205ENST00000480139 PPOXP50336 477 aa16.94■□□□□ 0.3
LIME1-205ENST00000480139 KLF3P57682 345 aaPredicted RBP16.94■□□□□ 0.3
LIME1-205ENST00000480139 SELENOVP59797 346 aa16.94■□□□□ 0.3
LIME1-205ENST00000480139 IL5RAQ01344 420 aa16.94■□□□□ 0.3
LIME1-205ENST00000480139 ROM1Q03395 351 aa16.94■□□□□ 0.3
LIME1-205ENST00000480139 MAD2L1BPQ15013 274 aaPredicted RBP16.94■□□□□ 0.3
LIME1-205ENST00000480139 KLF14Q8TD94 323 aaPredicted RBP16.94■□□□□ 0.3
LIME1-205ENST00000480139 APH1BQ8WW43 257 aa16.94■□□□□ 0.3
LIME1-205ENST00000480139 TFAP2CQ92754 450 aa16.94■□□□□ 0.3
LIME1-205ENST00000480139 CACNG6Q9BXT2 260 aa16.94■□□□□ 0.3
LIME1-205ENST00000480139 OR2J1Q9GZK6 312 aa16.94■□□□□ 0.3
LIME1-205ENST00000480139 NIPAL2Q9H841 368 aa16.94■□□□□ 0.3
LIME1-205ENST00000480139 STARD10Q9Y365 291 aa16.94■□□□□ 0.3
LIME1-205ENST00000480139 ARFGEF3Q5TH69 2177 aa16.94■□□□□ 0.3
LIME1-205ENST00000480139 ZNF254O75437 659 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 OR2T7P0C7T2 308 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 HSD11B1P28845 292 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 GCH1P30793 250 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 HCCSP53701 268 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 AQP4P55087 323 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 ISL1P61371 349 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 USP51Q70EK9 711 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 SPATC1Q76KD6 591 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 OR2T27Q8NH04 317 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 TRMT61AQ96FX7 289 aaKnown RBP16.93■□□□□ 0.3
LIME1-205ENST00000480139 SYT3Q9BQG1 590 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 CXXC4Q9H2H0 198 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 SP140LQ9H930 580 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 SLCO1C1Q9NYB5 712 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 DUSP13Q9UII6 198 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 COPS3Q9UNS2 423 aa16.93■□□□□ 0.3
LIME1-205ENST00000480139 MAST4O15021 2626 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 ZNF670-ZNF695F2Z2N8 137 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 WBP4O75554 376 aaKnown RBP16.92■□□□□ 0.3
LIME1-205ENST00000480139 CLIC3O95833 236 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 DCTDP32321 178 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 ATP6V1E1P36543 226 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 SLC6A9P48067 706 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 PTH2RP49190 550 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 ZNF91Q05481 1191 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 EGR3Q06889 387 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 MOGQ16653 247 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 SPATA46Q5T0L3 261 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 FBXW12Q6X9E4 464 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 KRT77Q7Z794 578 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 LRP11Q86VZ4 500 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.92■□□□□ 0.3
LIME1-205ENST00000480139 ZNF679Q8IYX0 411 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 C8orf59Q8N0T1 100 aaPredicted RBP16.92■□□□□ 0.3
LIME1-205ENST00000480139 RNFT2Q96EX2 444 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 OR8B4Q96RC9 309 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 MROQ9BYG7 248 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 MYEF2Q9P2K5 600 aaKnown RBP16.92■□□□□ 0.3
LIME1-205ENST00000480139 AASSQ9UDR5 926 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 GPR160Q9UJ42 338 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 FZR1Q9UM11 496 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 EXOGQ9Y2C4 368 aaKnown RBP16.92■□□□□ 0.3
LIME1-205ENST00000480139 PCDHGB1Q9Y5G3 927 aa16.92■□□□□ 0.3
LIME1-205ENST00000480139 CCDC168Q8NDH2 2452 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 J3QRE1 110 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 M0R233 179 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 CLPTM1O96005 669 aa16.91■□□□□ 0.3
LIME1-205ENST00000480139 LCATP04180 440 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms