RNA–Protein interactions for RNA: ENST00000477994.1

CUEDC2-203, Transcript of CUE domain containing 2, humanhuman

TSL 2

Gene CUEDC2, Length 713 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-203ENST00000477994 APOBEC3DQ96AK3 386 aaPredicted RBP12.42□□□□□ -0.42
CUEDC2-203ENST00000477994 ZMYND19Q96E35 227 aaPredicted RBP12.42□□□□□ -0.42
CUEDC2-203ENST00000477994 NMNAT3Q96T66 252 aa12.42□□□□□ -0.42
CUEDC2-203ENST00000477994 SLC30A2Q9BRI3 323 aa12.42□□□□□ -0.42
CUEDC2-203ENST00000477994 NTN4Q9HB63 628 aa12.42□□□□□ -0.42
CUEDC2-203ENST00000477994 SPAG4Q9NPE6 437 aa12.42□□□□□ -0.42
CUEDC2-203ENST00000477994 DDX28Q9NUL7 540 aaKnown RBP12.42□□□□□ -0.42
CUEDC2-203ENST00000477994 OR5V1Q9UGF6 321 aa12.42□□□□□ -0.42
CUEDC2-203ENST00000477994 B9D1Q9UPM9 204 aa12.42□□□□□ -0.42
CUEDC2-203ENST00000477994 IQCF6A8MYZ5 107 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 HLA-DPB1P04440 258 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 WNT2P09544 360 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 RPS2P15880 293 aaKnown RBP12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 ANOS1P23352 680 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 CRABP1P29762 137 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 PMELP40967 661 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 PAX2Q02962 417 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 KRTAP27-1Q3LI81 207 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 SLC18B1Q6NT16 456 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 PGM2L1Q6PCE3 622 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 DNM1P34Q6PK57 102 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 COLCA1Q6ZS62 124 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 MOGAT3Q86VF5 341 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 MUC20Q8N307 709 aaPredicted RBP12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 OR5L1Q8NGL2 311 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 OR4K13Q8NH42 304 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 ZNF582Q96NG8 517 aaPredicted RBP12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 MRI1Q9BV20 369 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 TMEM165Q9HC07 324 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 SRA1Q9HD15 236 aaKnown RBP12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 KRCC1Q9NPI7 259 aaPredicted RBP12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 PNRC2Q9NPJ4 139 aaKnown RBP12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 RPRD1BQ9NQG5 326 aaKnown RBP12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 ADA2Q9NZK5 511 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 LRCH1Q9Y2L9 728 aa12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 SOX21Q9Y651 276 aaPredicted RBP12.41□□□□□ -0.42
CUEDC2-203ENST00000477994 IGHV3OR16-10A0A075B7F0 116 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 GADD45GO95257 159 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 ACSM4P0C7M7 580 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 IGHV4-38-2P0DP08 117 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 HKR1P10072 659 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 SLC6A6P31641 620 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 CD80P33681 288 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 HOXA4Q00056 320 aaPredicted RBP12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 PAX8Q06710 450 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 RFX4Q33E94 735 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 HSP90B2PQ58FF3 399 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 NAA40Q86UY6 237 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 JAZF1Q86VZ6 243 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 KLBQ86Z14 1044 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 SDR9C7Q8NEX9 313 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 OR13G1Q8NGZ3 307 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 DACT3Q96B18 629 aaPredicted RBP12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 CMTM5Q96DZ9 223 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 ELAC2Q9BQ52 826 aaKnown RBP12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 TMEM246Q9BRR3 403 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 SSBP3Q9BWW4 388 aaPredicted RBP12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 PCDHGB1Q9Y5G3 927 aa12.4□□□□□ -0.42
CUEDC2-203ENST00000477994 DOCK11Q5JSL3 2073 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 TRAV40A0A0B4J280 105 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 IGHV2-70DA0A0C4DH43 119 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 A0A1B0GWJ7 208 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 OR6C68A6NDL8 312 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 F5H5K5 113 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 ARPC3O15145 178 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 WIPF1O43516 503 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 RENP00797 406 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 PSKH1P11801 424 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 PRTN3P24158 256 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 FPR3P25089 353 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 PRDX6P30041 224 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 MSX2P35548 267 aaPredicted RBP12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 SRP9P49458 86 aaKnown RBP12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 MAB21L1Q13394 359 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 GK2Q14410 553 aaPredicted RBP12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 KRT72Q14CN4 511 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 ZNF404Q494X3 552 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 SLC27A4Q6P1M0 643 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 ZBTB46Q86UZ6 589 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 PARP8Q8N3A8 854 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 C19orf18Q8NEA5 215 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 TAF15Q92804 592 aaKnown RBP eCLIP12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 PYURFQ96I23 114 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 ATF6BQ99941 703 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 IFT27Q9BW83 186 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 GORASP2Q9H8Y8 452 aa12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 MRPL22Q9NWU5 206 aaKnown RBP12.39□□□□□ -0.43
CUEDC2-203ENST00000477994 TRRAPQ9Y4A5 3859 aa12.38□□□□□ -0.43
CUEDC2-203ENST00000477994 MDFIC2A0A1B0GVS7 189 aa12.38□□□□□ -0.43
CUEDC2-203ENST00000477994 IFNL4K9M1U5 179 aa12.38□□□□□ -0.43
CUEDC2-203ENST00000477994 OR10H3O60404 316 aa12.38□□□□□ -0.43
CUEDC2-203ENST00000477994 RRM2P31350 389 aa12.38□□□□□ -0.43
CUEDC2-203ENST00000477994 GGT2P36268 569 aa12.38□□□□□ -0.43
CUEDC2-203ENST00000477994 RPS27P42677 84 aaKnown RBP12.38□□□□□ -0.43
CUEDC2-203ENST00000477994 GSSP48637 474 aa12.38□□□□□ -0.43
CUEDC2-203ENST00000477994 GNB2P62879 340 aa12.38□□□□□ -0.43
CUEDC2-203ENST00000477994 TRAP1Q12931 704 aaKnown RBP12.38□□□□□ -0.43
CUEDC2-203ENST00000477994 ZNF181Q2M3W8 571 aa12.38□□□□□ -0.43
CUEDC2-203ENST00000477994 PRAMEF6Q5VXH4 476 aa12.38□□□□□ -0.43
CUEDC2-203ENST00000477994 LYPD4Q6UWN0 246 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms