RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 RFPL4BQ6ZWI9 263 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 FAM220AQ7Z4H9 259 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 ZNF283Q8N7M2 679 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 DCLRE1CQ96SD1 692 aaKnown RBP13.24□□□□□ -0.29
SEC13-215ENST00000477547 KCNJ15Q99712 375 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 INPP5EQ9NRR6 644 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 PLCXD1Q9NUJ7 323 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 SCN3BQ9NY72 215 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 SLCO1C1Q9NYB5 712 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 CNOT2Q9NZN8 540 aaKnown RBP13.24□□□□□ -0.29
SEC13-215ENST00000477547 PSORS1C1Q9UIG5 152 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 GRIP1Q9Y3R0 1128 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 ATP23Q9Y6H3 246 aa13.24□□□□□ -0.29
SEC13-215ENST00000477547 F5H5K5 113 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 SMPD2O60906 423 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 CTAG2O75638 210 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 KRT8P05787 483 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 CCDC159P0C7I6 412 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 ACSM4P0C7M7 580 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 OTX1P32242 354 aaPredicted RBP13.23□□□□□ -0.29
SEC13-215ENST00000477547 WNT5AP41221 380 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 CX3CR1P49238 355 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 PRKXP51817 358 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 TPTEP56180 551 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 PSMA6P60900 246 aaKnown RBP13.23□□□□□ -0.29
SEC13-215ENST00000477547 CSNK2BP67870 215 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 ROM1Q03395 351 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 TLE4Q04727 773 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 EGR3Q06889 387 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 KRTAP27-1Q3LI81 207 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 RHOUQ7L0Q8 258 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.23□□□□□ -0.29
SEC13-215ENST00000477547 ZNF101Q8IZC7 436 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 ZNF540Q8NDQ6 660 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 GGHQ92820 318 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 C14orf79Q96F83 325 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 DOK1Q99704 481 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 ALG8Q9BVK2 526 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 MROQ9BYG7 248 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 CLEC4MQ9H2X3 399 aaPredicted RBP13.23□□□□□ -0.29
SEC13-215ENST00000477547 FGF20Q9NP95 211 aaPredicted RBP13.23□□□□□ -0.29
SEC13-215ENST00000477547 UBAP1Q9NZ09 502 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 EIF3KQ9UBQ5 218 aaKnown RBP13.23□□□□□ -0.29
SEC13-215ENST00000477547 DIMT1Q9UNQ2 313 aaKnown RBP13.23□□□□□ -0.29
SEC13-215ENST00000477547 DSCAMO60469 2012 aa13.23□□□□□ -0.29
SEC13-215ENST00000477547 A0A1W2PPR1 153 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 FAM221AA4D161 298 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 MAGEB4O15481 346 aaPredicted RBP13.22□□□□□ -0.29
SEC13-215ENST00000477547 MYL12AP19105 171 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 DCKP27707 260 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 RGS6P49758 472 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 RIDAP52758 137 aaKnown RBP13.22□□□□□ -0.29
SEC13-215ENST00000477547 ACTA2P62736 377 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 ACTG2P63267 376 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 ST3GAL4Q11206 333 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 RBM48Q5RL73 367 aaKnown RBP13.22□□□□□ -0.29
SEC13-215ENST00000477547 ARL9Q6T311 187 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 DRAM2Q6UX65 266 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 ZNF679Q8IYX0 411 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 STX19Q8N4C7 294 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 NUP37Q8NFH4 326 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 ABHD4Q8TB40 342 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 SNX33Q8WV41 574 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 IPCEF1Q8WWN9 437 aaPredicted RBP13.22□□□□□ -0.29
SEC13-215ENST00000477547 NEUROG1Q92886 237 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 MRPL48Q96GC5 212 aaKnown RBP13.22□□□□□ -0.29
SEC13-215ENST00000477547 C4orf45Q96LM5 186 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 JAM3Q9BX67 310 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 NIPAL2Q9H841 368 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 ELOVL3Q9HB03 270 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 FKBP14Q9NWM8 211 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 ERVK13-1Q9NX77 482 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 MRM2Q9UI43 246 aaKnown RBP13.22□□□□□ -0.29
SEC13-215ENST00000477547 BLOC1S6Q9UL45 172 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 EXOSC1Q9Y3B2 195 aaKnown RBP13.22□□□□□ -0.29
SEC13-215ENST00000477547 TPRKBQ9Y3C4 175 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 SPEF1Q9Y4P9 236 aa13.22□□□□□ -0.29
SEC13-215ENST00000477547 HRNRQ86YZ3 2850 aaPredicted RBP13.22□□□□□ -0.29
SEC13-215ENST00000477547 GPRIN2O60269 458 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 ICMTO60725 284 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 ZNF254O75437 659 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 APOC1P02654 83 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 ANXA2P07355 339 aaKnown RBP13.21□□□□□ -0.29
SEC13-215ENST00000477547 ADRA2AP08913 450 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 SLC2A1P11166 492 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 NR4A1P22736 598 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 CRHBPP24387 322 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 PCSK6P29122 969 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 SSTR2P30874 369 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 RPS23P62266 143 aaKnown RBP13.21□□□□□ -0.29
SEC13-215ENST00000477547 NKX6-1P78426 367 aaPredicted RBP13.21□□□□□ -0.29
SEC13-215ENST00000477547 ZNF829Q3KNS6 432 aaPredicted RBP13.21□□□□□ -0.29
SEC13-215ENST00000477547 ZNF672Q499Z4 452 aaPredicted RBP13.21□□□□□ -0.29
SEC13-215ENST00000477547 CDONQ4KMG0 1287 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 TP53I3Q53FA7 332 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 DEGS2Q6QHC5 323 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 VHLLQ6RSH7 139 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 UNQ6126/PRO20091Q6UXV3 157 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 PLEKHG7Q6ZR37 379 aa13.21□□□□□ -0.29
SEC13-215ENST00000477547 LHFPL3Q86UP9 236 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms