RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 FBXO17Q96EF6 278 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 ZMAT3Q9HA38 289 aaKnown RBP7.92□□□□□ -1.14
HPS4-209ENST00000466781 CTSFQ9UBX1 484 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 LOC107986453A0A1B0GWG9 222 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 FAM90A27PA6NNH2 459 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 ZNF195O14628 629 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 CXCL13O43927 109 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 CCL7P80098 99 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 PLAC9Q5JTB6 97 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 FCRL6Q6DN72 434 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 Q6ZS52 159 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 OR52N5Q8NH56 324 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 ZNF2Q9BSG1 426 aaPredicted RBP7.92□□□□□ -1.14
HPS4-209ENST00000466781 FGF22Q9HCT0 170 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 CLCF1Q9UBD9 225 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 LRRC3CA6NJW4 275 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 PIAS2O75928 621 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 OR2J2O76002 312 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 MT-ND4LP03901 98 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 SPP1P10451 314 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 MYF5P13349 255 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 MRPL19P49406 292 aaKnown RBP7.92□□□□□ -1.14
HPS4-209ENST00000466781 SMIM21Q3B7S5 101 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 HIST2H3AQ71DI3 136 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 NLRP8Q86W28 1048 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 KMT5CQ86Y97 462 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 SIAH3Q8IW03 269 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 SFT2D1Q8WV19 159 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 Q96M85 177 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 SLAMF8Q9P0V8 285 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 PSORS1C1Q9UIG5 152 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 SNX11Q9Y5W9 270 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 TRGV10A0A0A0MS01 117 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 SCO1O75880 301 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 ZDHHC11BP0C7U3 371 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 CD22P20273 847 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 MPLP40238 635 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 SMN1Q16637 294 aaKnown RBP7.92□□□□□ -1.14
HPS4-209ENST00000466781 Q56UQ5 140 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 SPANXN5Q5MJ07 72 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 CA13Q8N1Q1 262 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 NHLRC2Q8NBF2 726 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 LFNGQ8NES3 379 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 OR52N1Q8NH53 320 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 BAHD1Q8TBE0 780 aaPredicted RBP7.92□□□□□ -1.14
HPS4-209ENST00000466781 CA5BP1Q8WTZ4 195 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 MS4A6EQ96DS6 147 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 MYEOVQ96EZ4 313 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 ZNF251Q9BRH9 671 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 JAM3Q9BX67 310 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 PCED1AQ9H1Q7 454 aa7.92□□□□□ -1.14
HPS4-209ENST00000466781 DBX1A6NMT0 343 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 METTL12A8MUP2 240 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 NUPL2O15504 423 aaKnown RBP7.91□□□□□ -1.14
HPS4-209ENST00000466781 SPRY3O43610 288 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 SSSCA1O60232 199 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 RFC3P40938 356 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 FAM109BQ6ICB4 259 aaPredicted RBP7.91□□□□□ -1.14
HPS4-209ENST00000466781 ZNF620Q6ZNG0 422 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 SLC38A9Q8NBW4 561 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 OR10P1Q8NGE3 313 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 ST8SIA1Q92185 356 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 LYSMD1Q96S90 227 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 DHRS4Q9BTZ2 278 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 TXLNGYQ9BZA5 131 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 ACTR3CQ9C0K3 210 aaPredicted RBP7.91□□□□□ -1.14
HPS4-209ENST00000466781 NARFLQ9H6Q4 476 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 MYOZ1Q9NP98 299 aaPredicted RBP7.91□□□□□ -1.14
HPS4-209ENST00000466781 DUSP22Q9NRW4 184 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 AK3Q9UIJ7 227 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 KCNG2Q9UJ96 466 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 DAPP1Q9UN19 280 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 ZNF835Q9Y2P0 537 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 TMEM202A6NGA9 273 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 PLPP1O14494 284 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 ACOT8O14734 319 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 ZGLP1P0C6A0 271 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 OR13C7P0DN81 318 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 NPPBP16860 134 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 SDHAP31040 664 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 CAPZBP47756 277 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 PPP2CBP62714 309 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 PPP2CAP67775 309 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 SIGLEC14Q08ET2 396 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 Q1RN00 199 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 SLC16A11Q8NCK7 471 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 DEFB124Q8NES8 71 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 OR5M9Q8NGP3 310 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 RANGRFQ9HD47 186 aaPredicted RBP7.91□□□□□ -1.14
HPS4-209ENST00000466781 DLEC1Q9Y238 1755 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 C5orf67F2Z3F1 127 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 OR7C2O60412 319 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 IGLV3-27P01718 113 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 ALPLP05186 524 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 TMEM196Q5HYL7 178 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 SAXO2Q658L1 398 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 TMEM211Q6ICI0 200 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 SLC25A6P12236 298 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 SOX18P35713 384 aa7.91□□□□□ -1.14
HPS4-209ENST00000466781 P2RX3P56373 397 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms