RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 DBHP09172 617 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 COX5BP10606 129 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 NAT2P11245 290 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 ZNF250P15622 560 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 ENTPD1P49961 510 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 AQP4P55087 323 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 KLF3P57682 345 aaPredicted RBP14.6□□□□□ -0.07
VPS52-215ENST00000464425 RPS7P62081 194 aaKnown RBP14.6□□□□□ -0.07
VPS52-215ENST00000464425 HIST1H3AP68431 136 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 CARTPTQ16568 116 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 HIST2H3PS2Q5TEC6 136 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 LCN1P1Q5VSP4 162 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 ZNF691Q5VV52 312 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 TMEM154Q6P9G4 183 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 LYPD4Q6UWN0 246 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 RFPL4BQ6ZWI9 263 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 HIST2H3AQ71DI3 136 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 ENTHD1Q8IYW4 607 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 SETD9Q8NE22 299 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 SLC25A40Q8TBP6 338 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 ZNF582Q96NG8 517 aaPredicted RBP14.6□□□□□ -0.07
VPS52-215ENST00000464425 REG4Q9BYZ8 158 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 WARS2Q9UGM6 360 aaKnown RBP14.6□□□□□ -0.07
VPS52-215ENST00000464425 COMMD3-BMI1R4GMX3 469 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 HSPE1-MOB4S4R3N1 261 aa14.6□□□□□ -0.07
VPS52-215ENST00000464425 CCDC182A6NF36 153 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 OR6C6A6NF89 314 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 ZNF593O00488 134 aaPredicted RBP14.59□□□□□ -0.07
VPS52-215ENST00000464425 ABHD16AO95870 558 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 ERCC1P07992 297 aaPredicted RBP14.59□□□□□ -0.07
VPS52-215ENST00000464425 HTR1FP30939 366 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 MPV17P39210 176 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 RPS27P42677 84 aaKnown RBP14.59□□□□□ -0.07
VPS52-215ENST00000464425 HSPA13P48723 471 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 DSCR9P59020 149 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 PPP1CBP62140 327 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 GGTLC2Q14390 218 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 NKPD1Q17RQ9 610 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 ZNF718Q3SXZ3 478 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 ELFN2Q5R3F8 820 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 SLC18B1Q6NT16 456 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 ARL9Q6T311 187 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 UNQ6126/PRO20091Q6UXV3 157 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 BCDIN3DQ7Z5W3 292 aaKnown RBP14.59□□□□□ -0.07
VPS52-215ENST00000464425 TIGD4Q8IY51 512 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 OR2AJ1Q8NGZ0 328 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 FAM168AQ92567 244 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 ZMYND19Q96E35 227 aaPredicted RBP14.59□□□□□ -0.07
VPS52-215ENST00000464425 Q96MT0 163 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 INTS14Q96SY0 518 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 OR2J1Q9GZK6 312 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 MS4A5Q9H3V2 200 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 WDR76Q9H967 626 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 ELOVL3Q9HB03 270 aa14.59□□□□□ -0.07
VPS52-215ENST00000464425 SNTNA6NMZ2 147 aa14.58□□□□□ -0.08
VPS52-215ENST00000464425 GCH1P30793 250 aa14.58□□□□□ -0.08
VPS52-215ENST00000464425 ISL1P61371 349 aa14.58□□□□□ -0.08
VPS52-215ENST00000464425 IZUMO2Q6UXV1 221 aa14.58□□□□□ -0.08
VPS52-215ENST00000464425 CFAP77Q6ZQR2 320 aa14.58□□□□□ -0.08
VPS52-215ENST00000464425 USP51Q70EK9 711 aa14.58□□□□□ -0.08
VPS52-215ENST00000464425 Q71RC1 249 aaPredicted RBP14.58□□□□□ -0.08
VPS52-215ENST00000464425 SHFQ7M4L6 423 aa14.58□□□□□ -0.08
VPS52-215ENST00000464425 BIVMQ86UB2 503 aa14.58□□□□□ -0.08
VPS52-215ENST00000464425 KLF14Q8TD94 323 aaPredicted RBP14.58□□□□□ -0.08
VPS52-215ENST00000464425 NEU4Q8WWR8 484 aaPredicted RBP14.58□□□□□ -0.08
VPS52-215ENST00000464425 MARS2Q96GW9 593 aaKnown RBP14.58□□□□□ -0.08
VPS52-215ENST00000464425 POFUT1Q9H488 388 aa14.58□□□□□ -0.08
VPS52-215ENST00000464425 CLN6Q9NWW5 311 aa14.58□□□□□ -0.08
VPS52-215ENST00000464425 SLCO1C1Q9NYB5 712 aa14.58□□□□□ -0.08
VPS52-215ENST00000464425 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.58□□□□□ -0.08
VPS52-215ENST00000464425 CSPG4Q6UVK1 2322 aa14.58□□□□□ -0.08
VPS52-215ENST00000464425 IGLV3-9A0A075B6K5 115 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 ENTPD6O75354 484 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 CLIC3O95833 236 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 DAOP14920 347 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 PDLIM4P50479 330 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 SNCBQ16143 134 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 CLEC9AQ6UXN8 241 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 SLC16A9Q7RTY1 509 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 ERI1Q8IV48 349 aaKnown RBP14.57□□□□□ -0.08
VPS52-215ENST00000464425 C8orf59Q8N0T1 100 aaPredicted RBP14.57□□□□□ -0.08
VPS52-215ENST00000464425 C10orf105Q8TEF2 133 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 IPCEF1Q8WWN9 437 aaPredicted RBP14.57□□□□□ -0.08
VPS52-215ENST00000464425 GTF3AQ92664 365 aaKnown RBP14.57□□□□□ -0.08
VPS52-215ENST00000464425 COQ7Q99807 217 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 HDHD2Q9H0R4 259 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 TBCCD1Q9NVR7 557 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 DNAJC27Q9NZQ0 273 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 ATPIF1Q9UII2 106 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 GPR160Q9UJ42 338 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 STARD10Q9Y365 291 aa14.57□□□□□ -0.08
VPS52-215ENST00000464425 LYNX1G3V0Z9 82 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 ICMTO60725 284 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 LY6G6DO95868 133 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 IGHV3-13P01766 116 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 GNAO1P09471 354 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 SPARCP09486 303 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 CSF3P09919 207 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 LYNX1P0DP58 116 aa14.56□□□□□ -0.08
VPS52-215ENST00000464425 PSKH1P11801 424 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms