RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 TAS2R19P59542 299 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 Q0VFX4 171 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 GK2Q14410 553 aaPredicted RBP11.09□□□□□ -0.63
COL4A6-204ENST00000461897 SSPNQ14714 243 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 INPP5JQ15735 1006 aaPredicted RBP11.09□□□□□ -0.63
COL4A6-204ENST00000461897 MEP1BQ16820 701 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 SFRP5Q5T4F7 317 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 TMEM164Q5U3C3 297 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 SLC18B1Q6NT16 456 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 STEAP1BQ6NZ63 245 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 GSG1LQ6UXU4 331 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 PM20D2Q8IYS1 436 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 ESX1Q8N693 406 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 OR51S1Q8NGJ8 323 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 OR5M9Q8NGP3 310 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 CCDC107Q8WV48 283 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 ST8SIA1Q92185 356 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 PTX4Q96A99 478 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 DNAJA3Q96EY1 480 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 LINC00052Q96N35 136 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 PPP4R1LQ9P1A2 415 aa11.09□□□□□ -0.63
COL4A6-204ENST00000461897 CDV3Q9UKY7 258 aaKnown RBP11.09□□□□□ -0.63
COL4A6-204ENST00000461897 CELSR3Q9NYQ7 3312 aa11.08□□□□□ -0.63
COL4A6-204ENST00000461897 RFPL4AA6NLU0 287 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 RFPL4AL1F8VTS6 287 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 TPD52L2O43399 206 aaKnown RBP11.08□□□□□ -0.64
COL4A6-204ENST00000461897 KDM4BO94953 1096 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 CD74P04233 296 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 RLN1P04808 185 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 LPLP06858 475 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 POU3F2P20265 443 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-204ENST00000461897 NUP62P37198 522 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-204ENST00000461897 RPL27P61353 136 aaKnown RBP11.08□□□□□ -0.64
COL4A6-204ENST00000461897 GUCA2AQ02747 115 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 GLT8D1Q68CQ7 371 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 TMEM225Q6GV28 225 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 LRRC69Q6ZNQ3 347 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 MAMDC2Q7Z304 686 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-204ENST00000461897 CATSPERDQ86XM0 798 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 GABRG1Q8N1C3 465 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 ARMC10Q8N2F6 343 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 ZNF454Q8N9F8 522 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 OR1J4Q8NGS1 313 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 TSEN15Q8WW01 171 aaKnown RBP11.08□□□□□ -0.64
COL4A6-204ENST00000461897 CXorf58Q96LI9 332 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 POTEKPQ9BYX7 375 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 ARL6Q9H0F7 186 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 MRPL22Q9NWU5 206 aaKnown RBP11.08□□□□□ -0.64
COL4A6-204ENST00000461897 PFDN2Q9UHV9 154 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 VDAC3Q9Y277 283 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 ZNF292O60281 2723 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 MEGF11A6BM72 1044 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 TRIM77I1YAP6 450 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 ETV2O00321 342 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-204ENST00000461897 XKRYO14609 159 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 GOSR2O14653 212 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 SRSF10O75494 262 aaKnown RBP11.08□□□□□ -0.64
COL4A6-204ENST00000461897 SLC25A12O75746 678 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 DXOO77932 396 aaKnown RBP11.08□□□□□ -0.64
COL4A6-204ENST00000461897 TNFSF15O95150 251 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 CD8AP01732 235 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 CD3DP04234 171 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 FOXF1Q12946 379 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 DCAF12L2Q5VW00 463 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 ZNF660Q6AZW8 331 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-204ENST00000461897 KCTD18Q6PI47 426 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-204ENST00000461897 BVESQ8NE79 360 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 TNFAIP8L1Q8WVP5 186 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 ASB5Q8WWX0 329 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 TMEM234Q8WY98 164 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 SEH1LQ96EE3 360 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 OR11A1Q9GZK7 315 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 TXNIPQ9H3M7 391 aa11.08□□□□□ -0.64
COL4A6-204ENST00000461897 A0A1B0GTI1 187 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 SPAARA0A1B0GVQ0 90 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 LOC390937A0A1W2PQ73 354 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 A8MVM7 634 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 CDK2AP1O14519 115 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 SIX6O95475 246 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 PNPP00491 289 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 HPP00738 406 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 FTH1P19P0C7X4 201 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 MPZP25189 248 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 DLSTP36957 453 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 RPS27P42677 84 aaKnown RBP11.07□□□□□ -0.64
COL4A6-204ENST00000461897 SSR4P51571 173 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 CAPZA1P52907 286 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 MLF1P58340 268 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 TUSC1Q2TAM9 212 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 PLPPR5Q32ZL2 321 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 LY6G6FQ5SQ64 297 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 PRAMEF20Q5VT98 475 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 C1orf140Q5VVS0 124 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 LPCAT3Q6P1A2 487 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 TMEM81Q6P7N7 255 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 OPN5Q6U736 354 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 TFAP2EQ6VUC0 442 aa11.07□□□□□ -0.64
COL4A6-204ENST00000461897 RPS19BP1Q86WX3 136 aaKnown RBP11.07□□□□□ -0.64
COL4A6-204ENST00000461897 LYPD6Q86Y78 171 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms