RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TMCC3Q9ULS5 477 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 A4GNTQ9UNA3 340 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 PPP1R3CQ9UQK1 317 aa14.41□□□□□ -0.1
TOP3A-202ENST00000461127 A0A0B4J2E0 115 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 A0A1B0GX12 115 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 C5orf63A6NC05 138 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 SURF4O15260 269 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 TPST2O60704 377 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 GADD45GO95257 159 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 CSF1P09603 554 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 ARHGDIAP52565 204 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 ST3GAL3Q11203 375 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 HNRNPA0Q13151 305 aaKnown RBP14.4□□□□□ -0.1
TOP3A-202ENST00000461127 CDK5R2Q13319 367 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 MELKQ14680 651 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 SNCBQ16143 134 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 ZNF613Q6PF04 617 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 OR52J3Q8NH60 311 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 TBC1D15Q8TC07 691 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 ADAMTS16Q8TE57 1224 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 POM121L2Q96KW2 1035 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 RASSF4Q9H2L5 321 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 NMNAT1Q9HAN9 279 aaPredicted RBP14.4□□□□□ -0.1
TOP3A-202ENST00000461127 ELOVL3Q9HB03 270 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 MIOXQ9UGB7 285 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 U3KQV3 271 aa14.4□□□□□ -0.1
TOP3A-202ENST00000461127 KIR2DS1A0A191URI9 304 aa14.39□□□□□ -0.11
TOP3A-202ENST00000461127 SAC3D1A6NKF1 404 aa14.39□□□□□ -0.11
TOP3A-202ENST00000461127 FFAR1O14842 300 aa14.39□□□□□ -0.11
TOP3A-202ENST00000461127 MELTFP08582 738 aa14.39□□□□□ -0.11
TOP3A-202ENST00000461127 THRBP10828 461 aa14.39□□□□□ -0.11
TOP3A-202ENST00000461127 PROK1P58294 105 aa14.39□□□□□ -0.11
TOP3A-202ENST00000461127 GK3PQ14409 553 aa14.39□□□□□ -0.11
TOP3A-202ENST00000461127 TRAM2Q15035 370 aa14.39□□□□□ -0.11
TOP3A-202ENST00000461127 SWT1Q5T5J6 900 aaKnown RBP14.39□□□□□ -0.11
TOP3A-202ENST00000461127 OR2Z1Q8NG97 314 aa14.39□□□□□ -0.11
TOP3A-202ENST00000461127 MCHR2Q969V1 340 aa14.39□□□□□ -0.11
TOP3A-202ENST00000461127 SIGLEC11Q96RL6 698 aa14.39□□□□□ -0.11
TOP3A-202ENST00000461127 SIAEQ9HAT2 523 aa14.39□□□□□ -0.11
TOP3A-202ENST00000461127 SLC7A7Q9UM01 511 aa14.39□□□□□ -0.11
TOP3A-202ENST00000461127 G3V4G9 280 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 IFNL4K9M1U5 179 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 ZNF32P17041 273 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 PPP1R8Q12972 351 aaKnown RBP14.38□□□□□ -0.11
TOP3A-202ENST00000461127 TAF11Q15544 211 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 FAM189A2Q15884 450 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 ZNF774Q6NX45 483 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 ARL9Q6T311 187 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 RFPL4BQ6ZWI9 263 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 NLRC3Q7RTR2 1065 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 TSPYL5Q86VY4 417 aaPredicted RBP14.38□□□□□ -0.11
TOP3A-202ENST00000461127 ALDH16A1Q8IZ83 802 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 OR5K1Q8NHB7 308 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 EME1Q96AY2 570 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 NUDT16L1Q9BRJ7 211 aaKnown RBP14.38□□□□□ -0.11
TOP3A-202ENST00000461127 ANKRD19PQ9H560 264 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 NANSQ9NR45 359 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 MAN2C1Q9NTJ4 1040 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 VNN3Q9NY84 501 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 IL19Q9UHD0 177 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 LYVE1Q9Y5Y7 322 aa14.38□□□□□ -0.11
TOP3A-202ENST00000461127 LOC100509620A0A075B734 347 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 A0A1W2PRQ8 180 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 G3V2T6 193 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 TMEM178BH3BS89 294 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 GPR137BO60478 399 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 HIST1H2ABP04908 130 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 GSTM3P21266 225 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 DGCR6Q14129 220 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 KPRPQ5T749 579 aaPredicted RBP14.37□□□□□ -0.11
TOP3A-202ENST00000461127 SLC27A4Q6P1M0 643 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 HIST3H2AQ7L7L0 130 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 RRM2BQ7LG56 351 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 HDDC2Q7Z4H3 204 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 KLBQ86Z14 1044 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 ZDHHC13Q8IUH4 622 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 OR8B3Q8NGG8 313 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 AKR7LQ8NHP1 331 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 ITLN1Q8WWA0 313 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 HIST1H2ACQ93077 130 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 DACT3Q96B18 629 aaPredicted RBP14.37□□□□□ -0.11
TOP3A-202ENST00000461127 NEIL1Q96FI4 390 aaPredicted RBP14.37□□□□□ -0.11
TOP3A-202ENST00000461127 DHRS1Q96LJ7 313 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 OR8B2Q96RD0 313 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 C9orf16Q9BUW7 83 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 VCX3BQ9H321 246 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 TAS2R5Q9NYW4 299 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 OAZ3Q9UMX2 235 aa14.37□□□□□ -0.11
TOP3A-202ENST00000461127 KMT2CQ8NEZ4 4911 aaKnown RBP14.37□□□□□ -0.11
TOP3A-202ENST00000461127 TRBV4-1A0A0J9YWV2 114 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 CENPBD1B2RD01 187 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 MCIDASD6RGH6 385 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 CHP2O43745 196 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 PIP5K1CO60331 668 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 CCNB2O95067 398 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 PRB2P02812 416 aaPredicted RBP14.36□□□□□ -0.11
TOP3A-202ENST00000461127 RBMXP38159 391 aaKnown RBP14.36□□□□□ -0.11
TOP3A-202ENST00000461127 FGF12P61328 243 aa14.36□□□□□ -0.11
TOP3A-202ENST00000461127 MRPS34P82930 218 aaKnown RBP14.36□□□□□ -0.11
TOP3A-202ENST00000461127 PSG7Q13046 419 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms