RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 KIRREL2Q6UWL6 708 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 TMEM108Q6UXF1 575 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 GLDNQ6ZMI3 551 aaPredicted RBP6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 FCRLAQ7L513 359 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 RAB42Q8N4Z0 105 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 C11orf42Q8N5U0 333 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 SLC38A9Q8NBW4 561 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 OR4F15Q8NGB8 312 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 OR52E1Q8NGJ3 308 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 OR51L1Q8NGJ5 315 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 CCL4L1Q8NHW4 92 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 DNASE2BQ8WZ79 361 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 SLC6A18Q96N87 628 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 SLC46A1Q96NT5 459 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 PRAP1Q96NZ9 151 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 NRTNQ99748 197 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 RSRP1Q9BUV0 290 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 PBDC1Q9BVG4 233 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 ZNF350Q9GZX5 532 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 RGCCQ9H4X1 137 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 LYRM2Q9NU23 88 aaPredicted RBP6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 TMEM140Q9NV12 185 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 KCNE5Q9UJ90 142 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 PPP1R3CQ9UQK1 317 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 OSGIN2Q9Y236 505 aa6.16□□□□□ -1.42
CUBNP3-201ENST00000457461 SDK1Q7Z5N4 2213 aa6.15□□□□□ -1.42
CUBNP3-201ENST00000457461 LOC105371242A0A075B767 164 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 A0A087WWC5 75 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 IGKV1-8A0A0C4DH67 115 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 ASPDHA6ND91 283 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 ANKRD61A6NGH8 418 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 GGT3PA6NGU5 568 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 UNC119BA6NIH7 251 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 RNF212BA8MTL3 300 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 ZNF593O00488 134 aaPredicted RBP6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 ADAP1O75689 374 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 CDRT1O95170 752 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 ETHE1O95571 254 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 TBX6O95947 436 aaPredicted RBP6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 C1QCP02747 245 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 DCNP07585 359 aaKnown RBP6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 BCKDHAP12694 445 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 CPEP16870 476 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 BMP5P22003 454 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 NFYBP25208 207 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 PEBP1P30086 187 aaKnown RBP6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 TIMP3P35625 211 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 RAB7AP51149 207 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 BLKP51451 505 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 MMP15P51511 669 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 F2RL1P55085 397 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 PSMA6P60900 246 aaKnown RBP6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 UFM1P61960 85 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 NKX6-1P78426 367 aaPredicted RBP6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 SSBP2P81877 361 aaPredicted RBP6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 RHOGP84095 191 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 PRDX1Q06830 199 aaKnown RBP6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 SIGLEC14Q08ET2 396 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 UBE2V2Q15819 145 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 PLK5Q496M5 336 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 TMEM268Q5VZI3 342 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 ZNF626Q68DY1 528 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 ADNP2Q6IQ32 1131 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 CLEC18BQ6UXF7 455 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 B3GLCTQ6Y288 498 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 TMEM91Q6ZNR0 172 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 ZNF605Q86T29 641 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 C17orf64Q86WR6 236 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 NRMQ8IXM6 262 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 FAM58AQ8N1B3 248 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 GABRG1Q8N1C3 465 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 OR1S2Q8NGQ3 325 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 OR2A1Q8NGT9 310 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 FLVCR1-AS1Q8TAF5 88 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 STT3BQ8TCJ2 826 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 SPPL2AQ8TCT8 520 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 RAB1CQ92928 201 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 UBE2E3Q969T4 207 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 KLHDC7BQ96G42 594 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 PGAM5Q96HS1 289 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 SLC35E1Q96K37 410 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 TMEM74Q96NL1 305 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 TP53RKQ96S44 253 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 HIST1H2BLQ99880 126 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 MIEN1Q9BRT3 115 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 TCEAL2Q9H3H9 227 aaPredicted RBP6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 TMEM27Q9HBJ8 222 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 DMRT3Q9NQL9 472 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 TXNL4BQ9NX01 149 aaKnown RBP6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 VPS29Q9UBQ0 182 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 TAC3Q9UHF0 121 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 TUBD1Q9UJT1 453 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 TNFRSF18Q9Y5U5 241 aa6.15□□□□□ -1.43
CUBNP3-201ENST00000457461 BDP1A6H8Y1 2624 aa6.14□□□□□ -1.43
CUBNP3-201ENST00000457461 LOC105369274A0A096LPK9 316 aa6.14□□□□□ -1.43
CUBNP3-201ENST00000457461 KIR2DS5A0A0G2JLQ3 304 aa6.14□□□□□ -1.43
CUBNP3-201ENST00000457461 A0A0G2JNG1 304 aa6.14□□□□□ -1.43
CUBNP3-201ENST00000457461 KANTRA0A1W2PQU2 76 aa6.14□□□□□ -1.43
CUBNP3-201ENST00000457461 ANKRD20A5PA0PJZ0 165 aa6.14□□□□□ -1.43
CUBNP3-201ENST00000457461 SLC22A31A6NKX4 558 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms