RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 SPTSSAQ969W0 71 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 ZNF799Q96GE5 643 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 KCNJ15Q99712 375 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 APOL4Q9BPW4 351 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 COPS4Q9BT78 406 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 OR2J1Q9GZK6 312 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 CXorf56Q9H5V9 222 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 CENPMQ9NSP4 180 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 CLN6Q9NWW5 311 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 MYEF2Q9P2K5 600 aaKnown RBP12.13□□□□□ -0.47
SMPD4-215ENST00000457039 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.13□□□□□ -0.47
SMPD4-215ENST00000457039 FZR1Q9UM11 496 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 STARD10Q9Y365 291 aa12.13□□□□□ -0.47
SMPD4-215ENST00000457039 H3BSA7 217 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 WBP4O75554 376 aaKnown RBP12.12□□□□□ -0.47
SMPD4-215ENST00000457039 CLPTM1O96005 669 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 TUBG1P23258 451 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 ANOS1P23352 680 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 CDKN1AP38936 164 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 SLC15A1P46059 708 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 AQP4P55087 323 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 TPTEP56180 551 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 ISL1P61371 349 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 GRB2P62993 217 aaKnown RBP12.12□□□□□ -0.47
SMPD4-215ENST00000457039 ROM1Q03395 351 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 POU4F2Q12837 409 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 IL18R1Q13478 541 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 SPATA46Q5T0L3 261 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 MBNL2Q5VZF2 373 aaKnown RBP12.12□□□□□ -0.47
SMPD4-215ENST00000457039 DRAM2Q6UX65 266 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 USP51Q70EK9 711 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 SLC35F2Q8IXU6 374 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 LRRC75A-AS1Q8N1F1 130 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 RFLNBQ8N5W9 214 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 SYNPRQ8TBG9 265 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 KLF14Q8TD94 323 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-215ENST00000457039 THEM6Q8WUY1 208 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 TFAP2CQ92754 450 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 APOBEC3DQ96AK3 386 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-215ENST00000457039 MNTQ99583 582 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 CACNG6Q9BXT2 260 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 GSX2Q9BZM3 304 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 CXXC4Q9H2H0 198 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 TUBG2Q9NRH3 451 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 LAMP5Q9UJQ1 280 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 TMEM14AQ9Y6G1 99 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 VPS13CQ709C8 3753 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 OTOGQ6ZRI0 2925 aa12.12□□□□□ -0.47
SMPD4-215ENST00000457039 H7C417 338 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 J3QRE1 110 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 APOL3O95236 402 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 IGHV3-13P01766 116 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 GNAO1P09471 354 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 MPV17P39210 176 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 MTNR1AP48039 350 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 PTH2RP49190 550 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 PRKXP51817 358 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 SNRPD2P62316 118 aaKnown RBP12.11□□□□□ -0.47
SMPD4-215ENST00000457039 IL5RAQ01344 420 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 TAF13Q15543 124 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 ZNF718Q3SXZ3 478 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 DEGS2Q6QHC5 323 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 LRRN1Q6UXK5 716 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 PRSS45Q7RTY3 260 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 Q96MT0 163 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 COG8Q96MW5 612 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 OR8B4Q96RC9 309 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 FOXC2Q99958 501 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 SYT3Q9BQG1 590 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 HSPE1-MOB4S4R3N1 261 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 MAST4O15021 2626 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 CCDC168Q8NDH2 2452 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 ARFGEF3Q5TH69 2177 aa12.11□□□□□ -0.47
SMPD4-215ENST00000457039 C5orf63A6NC05 138 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 SNTNA6NMZ2 147 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 PHYHO14832 338 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 H2BFMP0C1H6 154 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 OR2T7P0C7T2 308 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 DBTP11182 482 aaKnown RBP12.1□□□□□ -0.47
SMPD4-215ENST00000457039 CX3CR1P49238 355 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 PPOXP50336 477 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 KLF3P57682 345 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-215ENST00000457039 CXCR4P61073 352 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 ZNF91Q05481 1191 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 TESK1Q15569 626 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 SNAI3Q3KNW1 292 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 KCTD18Q6PI47 426 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-215ENST00000457039 FBXW12Q6X9E4 464 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 SSX6Q7RTT6 188 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 KRTAP1-3Q8IUG1 177 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 SETD9Q8NE22 299 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 OR2T27Q8NH04 317 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 FBLIM1Q8WUP2 373 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 ASB17Q8WXJ9 295 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 RNFT2Q96EX2 444 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 VCX3BQ9H321 246 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 MRPS18AQ9NVS2 196 aaKnown RBP12.1□□□□□ -0.47
SMPD4-215ENST00000457039 SLCO1C1Q9NYB5 712 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 DUSP13Q9UII6 198 aa12.1□□□□□ -0.47
SMPD4-215ENST00000457039 FBXO9Q9UK97 447 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms