RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 NUP50Q9UKX7 468 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 AUP1Q9Y679 476 aa13.42□□□□□ -0.26
GPC1-206ENST00000455111 DOCK11Q5JSL3 2073 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 MDFIC2A0A1B0GVS7 189 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 OR6C68A6NDL8 312 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 IQCF6A8MYZ5 107 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 HIST1H1CP16403 213 aaKnown RBP13.41□□□□□ -0.26
GPC1-206ENST00000455111 MSX2P35548 267 aaPredicted RBP13.41□□□□□ -0.26
GPC1-206ENST00000455111 GGT2P36268 569 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 MDH2P40926 338 aaKnown RBP13.41□□□□□ -0.26
GPC1-206ENST00000455111 LYPD2Q6UXB3 125 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 ADCK1Q86TW2 530 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 MOGAT3Q86VF5 341 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 BHLHE23Q8NDY6 225 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 C19orf18Q8NEA5 215 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 JMJD8Q96S16 334 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 DDOQ99489 341 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 COQ7Q99807 217 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 TMEM246Q9BRR3 403 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 OR52D1Q9H346 318 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 V9GYQ6 96 aa13.41□□□□□ -0.26
GPC1-206ENST00000455111 ACSM4P0C7M7 580 aa13.4□□□□□ -0.26
GPC1-206ENST00000455111 RPS27P42677 84 aaKnown RBP13.4□□□□□ -0.26
GPC1-206ENST00000455111 RAD23AP54725 363 aa13.4□□□□□ -0.26
GPC1-206ENST00000455111 RFX4Q33E94 735 aa13.4□□□□□ -0.26
GPC1-206ENST00000455111 LEG1Q6P5S2 330 aa13.4□□□□□ -0.26
GPC1-206ENST00000455111 SMARCD3Q6STE5 483 aa13.4□□□□□ -0.26
GPC1-206ENST00000455111 LYPD4Q6UWN0 246 aa13.4□□□□□ -0.26
GPC1-206ENST00000455111 ZNF841Q6ZN19 808 aa13.4□□□□□ -0.26
GPC1-206ENST00000455111 ZBTB46Q86UZ6 589 aa13.4□□□□□ -0.26
GPC1-206ENST00000455111 CYP4Z1Q86W10 505 aa13.4□□□□□ -0.26
GPC1-206ENST00000455111 KLBQ86Z14 1044 aa13.4□□□□□ -0.26
GPC1-206ENST00000455111 KLHL36Q8N4N3 616 aa13.4□□□□□ -0.26
GPC1-206ENST00000455111 ATG16L2Q8NAA4 619 aa13.4□□□□□ -0.26
GPC1-206ENST00000455111 OR4K13Q8NH42 304 aa13.4□□□□□ -0.26
GPC1-206ENST00000455111 MAP6Q96JE9 813 aa13.4□□□□□ -0.26
GPC1-206ENST00000455111 ERMAPQ96PL5 475 aaPredicted RBP13.4□□□□□ -0.26
GPC1-206ENST00000455111 SRA1Q9HD15 236 aaKnown RBP13.4□□□□□ -0.26
GPC1-206ENST00000455111 RPS6KA6Q9UK32 745 aa13.4□□□□□ -0.26
GPC1-206ENST00000455111 J3QW42 95 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 ARPC3O15145 178 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 TMPRSS2O15393 492 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 CCDC22O60826 627 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 PLATP00750 562 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 TNFSF4P23510 183 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 PRTN3P24158 256 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 GSSP48637 474 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 GK2Q14410 553 aaPredicted RBP13.39□□□□□ -0.27
GPC1-206ENST00000455111 ZNF404Q494X3 552 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 ARMCX4Q5H9R4 360 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 CLEC12AQ5QGZ9 265 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 ZNF362Q5T0B9 420 aaPredicted RBP13.39□□□□□ -0.27
GPC1-206ENST00000455111 PRAMEF6Q5VXH4 476 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 RRM2BQ7LG56 351 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 APOBEC3DQ96AK3 386 aaPredicted RBP13.39□□□□□ -0.27
GPC1-206ENST00000455111 ZNF747Q9BV97 191 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 CDADC1Q9BWV3 514 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 HDHD2Q9H0R4 259 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 NTN4Q9HB63 628 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 CTSZQ9UBR2 303 aa13.39□□□□□ -0.27
GPC1-206ENST00000455111 IGHV2-70DA0A0C4DH43 119 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 FPR2P25090 351 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 RGS6P49758 472 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 RPS6KA3P51812 740 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 SLC9A3R2Q15599 337 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 MPPED2Q15777 294 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 ZNF181Q2M3W8 571 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 C9orf139Q6ZV77 190 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 PARP8Q8N3A8 854 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 SDR9C7Q8NEX9 313 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 GJC3Q8NFK1 279 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 OR13G1Q8NGZ3 307 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 FANK1Q8TC84 345 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 UPRTQ96BW1 309 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 SSBP3Q9BWW4 388 aaPredicted RBP13.38□□□□□ -0.27
GPC1-206ENST00000455111 GORASP2Q9H8Y8 452 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 RPRD1BQ9NQG5 326 aaKnown RBP13.38□□□□□ -0.27
GPC1-206ENST00000455111 CD300AQ9UGN4 299 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 CYB5R1Q9UHQ9 305 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 AURKCQ9UQB9 309 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 LRCH1Q9Y2L9 728 aa13.38□□□□□ -0.27
GPC1-206ENST00000455111 C22orf46C9J442 243 aa13.37□□□□□ -0.27
GPC1-206ENST00000455111 TNFRSF13BO14836 293 aaPredicted RBP13.37□□□□□ -0.27
GPC1-206ENST00000455111 FPR3P25089 353 aa13.37□□□□□ -0.27
GPC1-206ENST00000455111 GATA4P43694 442 aa13.37□□□□□ -0.27
GPC1-206ENST00000455111 CENPAP49450 140 aa13.37□□□□□ -0.27
GPC1-206ENST00000455111 SNAI3Q3KNW1 292 aa13.37□□□□□ -0.27
GPC1-206ENST00000455111 ESCO2Q56NI9 601 aa13.37□□□□□ -0.27
GPC1-206ENST00000455111 PRR31Q5SQ13 230 aa13.37□□□□□ -0.27
GPC1-206ENST00000455111 PGBD2Q6P3X8 592 aa13.37□□□□□ -0.27
GPC1-206ENST00000455111 MUC20Q8N307 709 aaPredicted RBP13.37□□□□□ -0.27
GPC1-206ENST00000455111 OR8D4Q8NGM9 314 aa13.37□□□□□ -0.27
GPC1-206ENST00000455111 SGMS2Q8NHU3 365 aa13.37□□□□□ -0.27
GPC1-206ENST00000455111 ZMYND19Q96E35 227 aaPredicted RBP13.37□□□□□ -0.27
GPC1-206ENST00000455111 PYURFQ96I23 114 aa13.37□□□□□ -0.27
GPC1-206ENST00000455111 COG8Q96MW5 612 aa13.37□□□□□ -0.27
GPC1-206ENST00000455111 ZNF582Q96NG8 517 aaPredicted RBP13.37□□□□□ -0.27
GPC1-206ENST00000455111 ELAC2Q9BQ52 826 aaKnown RBP13.37□□□□□ -0.27
GPC1-206ENST00000455111 EGLN3Q9H6Z9 239 aa13.37□□□□□ -0.27
GPC1-206ENST00000455111 DDX28Q9NUL7 540 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms