RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 A0A1W2PRU2 124 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 SSSCA1O60232 199 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 CNMDO75829 334 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 FIGLAQ6QHK4 219 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 MARCH1Q8TCQ1 289 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 ADAT1Q9BUB4 502 aaKnown RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 KCNG2Q9UJ96 466 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 MALRD1Q5VYJ5 2156 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 HLA-DQB1P01920 261 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 TBXA2RP21731 343 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 ZNF776Q68DI1 518 aaPredicted RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 BMFQ96LC9 184 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 SGCZQ96LD1 299 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 AMDHD2Q9Y303 409 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 SNU13P55769 128 aaKnown RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 SLC7A9P82251 487 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 CCSMST1Q4G0I0 132 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 ABLIM2Q6H8Q1 611 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 OR11G2Q8NGC1 345 aa7.17□□□□□ -1.26
SMG1-202ENST00000446231 DHCR7Q9UBM7 475 aaKnown RBP7.17□□□□□ -1.26
SMG1-202ENST00000446231 OR2A4O95047 310 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 OR2A7Q96R45 310 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 MYOTQ9UBF9 498 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 TRAPPC1Q9Y5R8 145 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 SERTM1A2A2V5 107 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 C9orf170A2RU37 121 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 SDCBPO00560 298 aaPredicted RBP7.16□□□□□ -1.26
SMG1-202ENST00000446231 FAM110CQ1W6H9 321 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 PEX11GQ96HA9 241 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 MS4A8Q9BY19 250 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 PLEKHF2Q9H8W4 249 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 ZDHHC11Q9H8X9 412 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 C19orf53Q9UNZ5 99 aaPredicted RBP7.16□□□□□ -1.26
SMG1-202ENST00000446231 ZNF727A8MUV8 499 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 MALLQ13021 153 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 TESK1Q15569 626 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 AGBL4Q5VU57 503 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 NKAIN2Q5VXU1 208 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 FAM58AQ8N1B3 248 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 BORCS8Q96FH0 119 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 ALX4Q9H161 411 aaPredicted RBP7.16□□□□□ -1.26
SMG1-202ENST00000446231 SIRT3Q9NTG7 399 aaPredicted RBP7.16□□□□□ -1.26
SMG1-202ENST00000446231 C8AP07357 584 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 RSPRY1Q96DX4 576 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 SERINC2Q96SA4 455 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 PBX4Q9BYU1 374 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 ZNF286AQ9HBT8 521 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 F5H5K5 113 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 XRCC2O43543 280 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 ECI1P42126 302 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 TSFMP43897 325 aaKnown RBP7.16□□□□□ -1.26
SMG1-202ENST00000446231 TOMM34Q15785 309 aaPredicted RBP7.16□□□□□ -1.26
SMG1-202ENST00000446231 PNLIPRP3Q17RR3 467 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 MISPQ8IVT2 679 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 FAM160A2Q8N612 972 aaPredicted RBP7.16□□□□□ -1.26
SMG1-202ENST00000446231 DTWD2Q8NBA8 298 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 SMIM7Q9BQ49 75 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 LRRC37A3O60309 1634 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 IRS1P35568 1242 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 HNRNPA3P51991 378 aaKnown RBP7.16□□□□□ -1.26
SMG1-202ENST00000446231 ZNF787Q6DD87 383 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 C19orf48Q6RUI8 117 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 SEMA6CQ9H3T2 930 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 BANF2Q9H503 90 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 FASLGP48023 281 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 ELAVL3Q14576 367 aaKnown RBP7.16□□□□□ -1.26
SMG1-202ENST00000446231 ADRA2CP18825 462 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 CD96P40200 585 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 HNRNPKP61978 463 aaKnown RBP eCLIP7.16□□□□□ -1.26
SMG1-202ENST00000446231 SLC25A42Q86VD7 318 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 ELOVL1Q9BW60 279 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 OR52A1Q9UKL2 312 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 NSG1A0A0A6YYJ2 146 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 ZNF729A6NN14 1252 aaPredicted RBP7.16□□□□□ -1.26
SMG1-202ENST00000446231 HEXAP06865 529 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 C1SP09871 688 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 CSNK1A1P48729 337 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 LCN15Q6UWW0 184 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 BET1LQ9NYM9 111 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 OR52A4PA6NMU1 304 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 DOK2O60496 412 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 NINJ1Q92982 152 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 GCM1Q9NP62 436 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 MRPS18AQ9NVS2 196 aaKnown RBP7.16□□□□□ -1.26
SMG1-202ENST00000446231 LRP5LA4QPB2 252 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 SULT1A1P50225 295 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 PWWP2BQ6NUJ5 590 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 DLK2Q6UY11 383 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 Q96M85 177 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 PRRX2Q99811 253 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 KCNIP1Q9NZI2 227 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 OR2M5A3KFT3 312 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 RYDENQ9NUL5 291 aaKnown RBP7.16□□□□□ -1.26
SMG1-202ENST00000446231 IGLV3-25P01717 112 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 RAC2P15153 192 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 METTL27Q8N6F8 245 aaPredicted RBP7.16□□□□□ -1.26
SMG1-202ENST00000446231 MAGT1Q9H0U3 335 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 PDFQ9HBH1 243 aa7.16□□□□□ -1.26
SMG1-202ENST00000446231 VSIG4Q9Y279 399 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms