RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 C10orf35Q96D05 121 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 ZNF799Q96GE5 643 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 ZNF845Q96IR2 970 aaPredicted RBP5.32□□□□□ -1.56
VPS50-205ENST00000441602 SOSTQ9BQB4 213 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 ABCG5Q9H222 651 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 RGCCQ9H4X1 137 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 BCO1Q9HAY6 547 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 CRLF2Q9HC73 371 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 TMEM138Q9NPI0 162 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 ZNF275Q9NSD4 429 aaPredicted RBP5.32□□□□□ -1.56
VPS50-205ENST00000441602 TAS2R4Q9NYW5 299 aa5.32□□□□□ -1.56
VPS50-205ENST00000441602 A0A0A6YYH2 397 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 A6NJ64 397 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 H0YC42 278 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 MKRN2OSH3BPM6 223 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 RER1O15258 196 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 CRYABP02511 175 aaKnown RBP5.31□□□□□ -1.56
VPS50-205ENST00000441602 TTRP02766 147 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 CSF3P09919 207 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 HTR2CP28335 458 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 ARR3P36575 388 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 HTR5AP47898 357 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 HIST1H3AP68431 136 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 TMEM69Q5SWH9 247 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 HIST2H3PS2Q5TEC6 136 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 HIST2H3AQ71DI3 136 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.31□□□□□ -1.56
VPS50-205ENST00000441602 LRRC18Q8N456 261 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 SYNPRQ8TBG9 265 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 AKAP1Q92667 903 aaKnown RBP eCLIP5.31□□□□□ -1.56
VPS50-205ENST00000441602 ZNF775Q96BV0 537 aaPredicted RBP5.31□□□□□ -1.56
VPS50-205ENST00000441602 FGGYQ96C11 551 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 OCEL1Q9H607 264 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 ZDHHC11Q9H8X9 412 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 LIN7BQ9HAP6 207 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 CLEC4AQ9UMR7 237 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 A0A0U1RQV5 110 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 NAP1L6A6NFF2 107 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 F5H5K5 113 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 PAHP00439 452 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 HNRNPCP07910 306 aaKnown RBP eCLIP5.31□□□□□ -1.56
VPS50-205ENST00000441602 CELA3AP09093 270 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 UBBP0CG47 229 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 PSKH1P11801 424 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 CFPP27918 469 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 MNDAP41218 407 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 IFITM3Q01628 133 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 TGFBR3Q03167 851 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 FOXC1Q12948 553 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 ZNF169Q14929 603 aaPredicted RBP5.31□□□□□ -1.56
VPS50-205ENST00000441602 OR2A2Q6IF42 318 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 RAB12Q6IQ22 244 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 CCBE1Q6UXH8 406 aaPredicted RBP5.31□□□□□ -1.56
VPS50-205ENST00000441602 TOMM5Q8N4H5 51 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 OR10AC1Q8NH08 325 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 ABHD3Q8WU67 409 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 RNF166Q96A37 237 aaPredicted RBP5.31□□□□□ -1.56
VPS50-205ENST00000441602 NABP1Q96AH0 204 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 FAM3DQ96BQ1 224 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 FAM71F1Q96KD3 344 aaPredicted RBP5.31□□□□□ -1.56
VPS50-205ENST00000441602 ZFP3Q96NJ6 502 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 ALKBH3Q96Q83 286 aaPredicted RBP5.31□□□□□ -1.56
VPS50-205ENST00000441602 S100A13Q99584 98 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 UQCC2Q9BRT2 126 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 THAP7Q9BT49 309 aaPredicted RBP5.31□□□□□ -1.56
VPS50-205ENST00000441602 PCDHGA9Q9Y5G4 932 aaKnown RBP5.31□□□□□ -1.56
VPS50-205ENST00000441602 PCNX3Q9H6A9 2034 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 RPL36A-HNRNPH2H7BZ11 118 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 AQP7O14520 342 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 EEF1E1O43324 174 aaKnown RBP5.31□□□□□ -1.56
VPS50-205ENST00000441602 LYRM1O43325 122 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 GSTZ1O43708 216 aaPredicted RBP5.31□□□□□ -1.56
VPS50-205ENST00000441602 CEACAM4O75871 244 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 IGHG3P01860 377 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 HLA-DQB1P01920 261 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 DDOSTP39656 456 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 MMP15P51511 669 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 P2RY14Q15391 338 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 ADGRE4PQ86SQ3 457 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 SNX29P2Q8IUI4 249 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 CCDC36Q8IYA8 594 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 OR8B12Q8NGG6 310 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 OR10S1Q8NGN2 331 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 OR5H6Q8NGV6 325 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 FNDC9Q8TBE3 224 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 OR51E1Q8TCB6 317 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 FCAMRQ8WWV6 532 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 PP6455Q8WZ26 134 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 FAM46BQ96A09 425 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 HAVCR1Q96D42 359 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 GPER1Q99527 375 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 GPR84Q9NQS5 396 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 TAS2R8Q9NYW2 309 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 COPZ2Q9P299 210 aa5.31□□□□□ -1.56
VPS50-205ENST00000441602 REV3LO60673 3130 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 TRAV8-7A0A075B6U6 113 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 A0A0G2JMP0 313 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 A0A0X1KG70 313 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 FUOMA2VDF0 154 aa5.3□□□□□ -1.56
VPS50-205ENST00000441602 DHRS7CA6NNS2 312 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms