RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 ZBTB25P24278 435 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 GPR3P46089 330 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 REEP5Q00765 189 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 CLN3Q13286 438 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 BATFQ16520 125 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 GUK1Q16774 197 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 WDR38Q5JTN6 314 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 TMEM244Q5VVB8 128 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 SLC8B1Q6J4K2 584 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 RPUSD3Q6P087 351 aaKnown RBP6.78□□□□□ -1.32
HDAC9-214ENST00000441542 ABHD17CQ6PCB6 329 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 DEGS2Q6QHC5 323 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 LRRC25Q8N386 305 aaPredicted RBP6.78□□□□□ -1.32
HDAC9-214ENST00000441542 ASB17Q8WXJ9 295 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 S100A13Q99584 98 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 SOX7Q9BT81 388 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 FBRSQ9HAH7 460 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 GRHPRQ9UBQ7 328 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 IL19Q9UHD0 177 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 KPTNQ9Y664 436 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 WNT6Q9Y6F9 365 aa6.78□□□□□ -1.32
HDAC9-214ENST00000441542 NLRC5Q86WI3 1866 aa6.77□□□□□ -1.32
HDAC9-214ENST00000441542 UNC80Q8N2C7 3258 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 CYB5BO43169 146 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 ZNF205O95201 554 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 OR6A2O95222 327 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 MBP02144 154 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 CD46P15529 392 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 MECP2P51608 486 aaKnown RBP6.77□□□□□ -1.33
HDAC9-214ENST00000441542 RASGEF1BQ0VAM2 473 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 MEP1BQ16820 701 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 FAM110CQ1W6H9 321 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 KHDC3LQ587J8 217 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 FAM78AQ5JUQ0 283 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 LY6G5CQ5SRR4 150 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 TMEM215Q68D42 235 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 OR2T2Q6IF00 324 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 KIRREL2Q6UWL6 708 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 DRAM2Q6UX65 266 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 RD3Q7Z3Z2 195 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 REC114Q7Z4M0 266 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 DEFB128Q7Z7B8 93 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 NPEPL1Q8NDH3 523 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 SLC30A7Q8NEW0 376 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 OR56B1Q8NGI3 324 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 ZNF417Q8TAU3 575 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 SLC25A44Q96H78 314 aaPredicted RBP6.77□□□□□ -1.33
HDAC9-214ENST00000441542 CCDC74BQ96LY2 380 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 TOX2Q96NM4 488 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 TPSD1Q9BZJ3 242 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 PRDM13Q9H4Q3 707 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 MKKSQ9NPJ1 570 aaPredicted RBP6.77□□□□□ -1.33
HDAC9-214ENST00000441542 WIF1Q9Y5W5 379 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 SZT2Q5T011 3432 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 A0A087WZY1 265 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 TGIF2-C20orf24A0A0A6YYL0 155 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 IGKV1-8A0A0C4DH67 115 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 TEX13DA0A0J9YY54 714 aaPredicted RBP6.77□□□□□ -1.33
HDAC9-214ENST00000441542 NPIPB9F8W1W9 429 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 XRCC2O43543 280 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 TRGC2P03986 189 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 SOD3P08294 240 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 MMP7P09237 267 aaPredicted RBP6.77□□□□□ -1.33
HDAC9-214ENST00000441542 COX5BP10606 129 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 HTR2CP28335 458 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 DHPSP49366 369 aaPredicted RBP6.77□□□□□ -1.33
HDAC9-214ENST00000441542 DVL1P1P54792 670 aaPredicted RBP6.77□□□□□ -1.33
HDAC9-214ENST00000441542 CLDN6P56747 220 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 SP3Q02447 781 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 TMPRSS11FQ6ZWK6 438 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 COX15Q7KZN9 410 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 PAQR4Q8N4S7 273 aaPredicted RBP6.77□□□□□ -1.33
HDAC9-214ENST00000441542 FAM213BQ8TBF2 198 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 OR10C1Q96KK4 312 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 WFIKKN1Q96NZ8 548 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 NELFAQ9H3P2 528 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 OPA3Q9H6K4 179 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 RNF122Q9H9V4 155 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 PRDM7Q9NQW5 492 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 DHDHQ9UQ10 334 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 MRPS18BQ9Y676 258 aaKnown RBP6.77□□□□□ -1.33
HDAC9-214ENST00000441542 C5orf42Q9H799 3197 aa6.77□□□□□ -1.33
HDAC9-214ENST00000441542 GEMIN2O14893 280 aaKnown RBP6.76□□□□□ -1.33
HDAC9-214ENST00000441542 ADH1CP00326 375 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 F10P00742 488 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 OPN1LWP04000 364 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 NID1P14543 1247 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 ZNF25P17030 456 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-214ENST00000441542 TUBG1P23258 451 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 APLNRP35414 380 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 WASP42768 502 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 AFF3P51826 1226 aaKnown RBP6.76□□□□□ -1.33
HDAC9-214ENST00000441542 LSM6P62312 80 aaKnown RBP6.76□□□□□ -1.33
HDAC9-214ENST00000441542 FAM53BQ14153 422 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 HAGHQ16775 308 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 ITPRIPL2Q3MIP1 535 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 TEX30Q5JUR7 227 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 C10orf91Q5T1B1 145 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 ULK3Q6PHR2 472 aa6.76□□□□□ -1.33
HDAC9-214ENST00000441542 TMEM64Q6YI46 380 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms