RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ZNF121P58317 390 aaPredicted RBP6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 TAS2R43P59537 309 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 TFF3Q07654 80 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 MRPL28Q13084 256 aaKnown RBP6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 TIGD6Q17RP2 521 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 GFOD2Q3B7J2 385 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 UBE2UQ5VVX9 321 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 XAF1Q6GPH4 301 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 ARL9Q6T311 187 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 DRAM2Q6UX65 266 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 FAM57BQ71RH2 274 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 RHOUQ7L0Q8 258 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 COMMD2Q86X83 199 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZGRF1Q86YA3 2104 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZNF584Q8IVC4 421 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 PAQR4Q8N4S7 273 aaPredicted RBP6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 FAM169BQ8N8A8 192 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZNF485Q8NCK3 441 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 OR1J2Q8NGS2 313 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 HAVCR2Q8TDQ0 301 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 SSC4DQ8WTU2 575 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 UFD1Q92890 307 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 MUL1Q969V5 352 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 PGAM5Q96HS1 289 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 POM121L2Q96KW2 1035 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 MGLLQ99685 303 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 OR51B6Q9H340 312 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 MOB1AQ9H8S9 216 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 NGBQ9NPG2 151 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 BABAM2Q9NXR7 383 aa6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 EIF3KQ9UBQ5 218 aaKnown RBP6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 LSM2Q9Y333 95 aaKnown RBP6.87□□□□□ -1.31
HMGA1P4-201ENST00000428643 UBR5O95071 2799 aaPredicted RBP6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 GTF3C1Q12789 2109 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 BSNQ9UPA5 3926 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 PHF3Q92576 2039 aaKnown RBP6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 IGHV2OR16-5A0A0B4J2B6 119 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 IGHV1-18A0A0C4DH31 117 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 TRIM64CA6NLI5 447 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 CASKO14936 926 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 INMTO95050 263 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 LALBAP00709 142 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 IGLV1-44P01699 117 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 CRYAAP02489 173 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 LCATP04180 440 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 PCMT1P22061 227 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 OTX1P32242 354 aaPredicted RBP6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 DCTDP32321 178 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 PEX19P40855 299 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 KIR2DL3P43628 341 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 TGM4P49221 684 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 NAAAQ02083 359 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 HGFACQ04756 655 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 SLC3A1Q07837 685 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 MLLT11Q13015 90 aaPredicted RBP6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 DOC2BQ14184 412 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 TSTQ16762 297 aaKnown RBP6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 ODF4Q2M2E3 257 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 C3orf36Q3SXR2 165 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 ARMCX4Q5H9R4 360 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 WDR38Q5JTN6 314 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 RPL22L1Q6P5R6 122 aaKnown RBP6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 SEZ6L2Q6UXD5 910 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 TMEM108Q6UXF1 575 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 C22orf34Q6ZV56 151 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 RFPL4BQ6ZWI9 263 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 ZNF676Q8N7Q3 588 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 OR2G2Q8NGZ5 317 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 LINC01560Q8TB33 94 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 ABHD4Q8TB40 342 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 C4orf45Q96LM5 186 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 COG8Q96MW5 612 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 OPALINQ96PE5 141 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 DCLRE1CQ96SD1 692 aaKnown RBP6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 OR10A2Q9H208 303 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 SP140LQ9H930 580 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 FAM206AQ9NX38 181 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 CRNNQ9UBG3 495 aaPredicted RBP6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 OR52A1Q9UKL2 312 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 ALPK2Q86TB3 2170 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 NAV2Q8IVL1 2488 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 ARHGAP21Q5T5U3 1957 aa6.86□□□□□ -1.31
HMGA1P4-201ENST00000428643 ESPL1Q14674 2120 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 TRBV2A0A0J9YWF9 115 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 A1L4Q6 167 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 PRSS44E7EML9 344 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 ATP6V1G2-DDX39BF2Z307 99 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 H3BSH0 61 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 C19orf84I3L1E1 186 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 SRSF10O75494 262 aaKnown RBP6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 PNPP00491 289 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 FAM157BP0CG42 384 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 CELP19835 753 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 PTAFRP25105 342 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 CD40P25942 277 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 KIR3DL2P43630 455 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 RGS6P49758 472 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 MMP16P51512 607 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 NR1H2P55055 460 aa6.85□□□□□ -1.31
HMGA1P4-201ENST00000428643 GP2P55259 537 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms