RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 LRP12Q9Y561 859 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 ATP23Q9Y6H3 246 aa14.66□□□□□ -0.06
COL7A1-202ENST00000422991 DAPL1A0PJW8 107 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 EFCAB10A6NFE3 127 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 E7EQL1 145 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 PSMD9O00233 223 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 HS3ST1O14792 307 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 ZNF254O75437 659 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 FAM157BP0CG42 384 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 HSD11B1P28845 292 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 RGS6P49758 472 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 PRKXP51817 358 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 UCP2P55851 309 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 CSNK2BP67870 215 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 EGR3Q06889 387 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 ZNF684Q5T5D7 378 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 ARL9Q6T311 187 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 DRAM2Q6UX65 266 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 DOK1Q99704 481 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 MROQ9BYG7 248 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 OR51B6Q9H340 312 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 NIPAL2Q9H841 368 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 ELOVL3Q9HB03 270 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 INPP5EQ9NRR6 644 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 CA10Q9NS85 328 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 FKBP14Q9NWM8 211 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 UBAP1Q9NZ09 502 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 EIF3KQ9UBQ5 218 aaKnown RBP14.65□□□□□ -0.06
COL7A1-202ENST00000422991 MRM2Q9UI43 246 aaKnown RBP14.65□□□□□ -0.06
COL7A1-202ENST00000422991 IKZF2Q9UKS7 526 aa14.65□□□□□ -0.06
COL7A1-202ENST00000422991 DIMT1Q9UNQ2 313 aaKnown RBP14.65□□□□□ -0.06
COL7A1-202ENST00000422991 J3QW42 95 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 GPRIN2O60269 458 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 NGFP01138 241 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 ADRA2AP08913 450 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 DCKP27707 260 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 RAD52P43351 418 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 CX3CR1P49238 355 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 PSMA6P60900 246 aaKnown RBP14.64□□□□□ -0.07
COL7A1-202ENST00000422991 RPS23P62266 143 aaKnown RBP14.64□□□□□ -0.07
COL7A1-202ENST00000422991 COLCA1Q6ZS62 124 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 AHSA2Q719I0 299 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.64□□□□□ -0.07
COL7A1-202ENST00000422991 ZNF283Q8N7M2 679 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 ABHD4Q8TB40 342 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 TMEM171Q8WVE6 324 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 ZNF649Q9BS31 505 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 C1QTNF5Q9BXJ0 243 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 BCL2L14Q9BZR8 327 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 ZNF442Q9H7R0 627 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 PLEKHF2Q9H8W4 249 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 TBCCD1Q9NVR7 557 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 ERVK13-1Q9NX77 482 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 CISD1Q9NZ45 108 aaKnown RBP14.64□□□□□ -0.07
COL7A1-202ENST00000422991 POLQO75417 2590 aa14.64□□□□□ -0.07
COL7A1-202ENST00000422991 CREBBPQ92793 2442 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 MAGEB4O15481 346 aaPredicted RBP14.63□□□□□ -0.07
COL7A1-202ENST00000422991 APOC1P02654 83 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 KRT8P05787 483 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 CCDC159P0C7I6 412 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 ANOS1P23352 680 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 DCTDP32321 178 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 THBS4P35443 961 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 GLRXP35754 106 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 SLC6A9P48067 706 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 RIDAP52758 137 aaKnown RBP14.63□□□□□ -0.07
COL7A1-202ENST00000422991 ERVS71-1P61550 626 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 PPP1CBP62140 327 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 ST3GAL4Q11206 333 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 GALEQ14376 348 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 CDONQ4KMG0 1287 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 UNQ6126/PRO20091Q6UXV3 157 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 NAA40Q86UY6 237 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 ZNF540Q8NDQ6 660 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 OR1J1Q8NGS3 322 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 FBXW5Q969U6 566 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 APOBEC3DQ96AK3 386 aaPredicted RBP14.63□□□□□ -0.07
COL7A1-202ENST00000422991 TMEM80Q96HE8 168 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 DHRS9Q9BPW9 319 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 UBTD1Q9HAC8 227 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 SCN3BQ9NY72 215 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 ANKRD17O75179 2603 aaKnown RBP14.63□□□□□ -0.07
COL7A1-202ENST00000422991 MYO9AB2RTY4 2548 aa14.63□□□□□ -0.07
COL7A1-202ENST00000422991 METTL15A6NJ78 407 aa14.62□□□□□ -0.07
COL7A1-202ENST00000422991 SRSF10O75494 262 aaKnown RBP14.62□□□□□ -0.07
COL7A1-202ENST00000422991 SULT1C4O75897 302 aa14.62□□□□□ -0.07
COL7A1-202ENST00000422991 LCKP06239 509 aa14.62□□□□□ -0.07
COL7A1-202ENST00000422991 LIMS3P0CW19 117 aa14.62□□□□□ -0.07
COL7A1-202ENST00000422991 LIMS4P0CW20 117 aa14.62□□□□□ -0.07
COL7A1-202ENST00000422991 SLC2A1P11166 492 aa14.62□□□□□ -0.07
COL7A1-202ENST00000422991 CRHBPP24387 322 aa14.62□□□□□ -0.07
COL7A1-202ENST00000422991 ZNF121P58317 390 aaPredicted RBP14.62□□□□□ -0.07
COL7A1-202ENST00000422991 ACTA2P62736 377 aa14.62□□□□□ -0.07
COL7A1-202ENST00000422991 ACTG2P63267 376 aa14.62□□□□□ -0.07
COL7A1-202ENST00000422991 MED21Q13503 144 aa14.62□□□□□ -0.07
COL7A1-202ENST00000422991 ADIPOQQ15848 244 aa14.62□□□□□ -0.07
COL7A1-202ENST00000422991 MSMPQ1L6U9 139 aa14.62□□□□□ -0.07
COL7A1-202ENST00000422991 TP53I3Q53FA7 332 aa14.62□□□□□ -0.07
COL7A1-202ENST00000422991 RBM48Q5RL73 367 aaKnown RBP14.62□□□□□ -0.07
COL7A1-202ENST00000422991 ZNF544Q6NX49 715 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms