RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 MCTS1Q9ULC4 181 aaKnown RBP12.41□□□□□ -0.42
LIMS2-206ENST00000409754 TBC1D24Q9ULP9 559 aa12.41□□□□□ -0.42
LIMS2-206ENST00000409754 FOXJ3Q9UPW0 622 aa12.41□□□□□ -0.42
LIMS2-206ENST00000409754 TP53TG5Q9Y2B4 290 aa12.41□□□□□ -0.42
LIMS2-206ENST00000409754 A0A0B4J203 849 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 LOC107986453A0A1B0GWG9 222 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 ANXA2P2A6NMY6 339 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 ANXA2P07355 339 aaKnown RBP12.4□□□□□ -0.42
LIMS2-206ENST00000409754 CALCBP10092 127 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 CTSSP25774 331 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 CFPP27918 469 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 HIST1H3AP68431 136 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 P2RY14Q15391 338 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 HES5Q5TA89 166 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 HIST2H3PS2Q5TEC6 136 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 FAM27BQ5VT28 67 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 HIST2H3AQ71DI3 136 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 GPR137CQ8N3F9 429 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 OR4M1Q8NGD0 313 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 ZDHHC11Q9H8X9 412 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 PCDHGA9Q9Y5G4 932 aaKnown RBP12.4□□□□□ -0.42
LIMS2-206ENST00000409754 COL6A6A6NMZ7 2263 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 A0A1W2PQ09 198 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 H3BSH0 61 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 HLA-DQB1P01920 261 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 TTRP02766 147 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 MAS1P04201 325 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 ACSM4P0C7M7 580 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 IGFBP3P17936 291 aaPredicted RBP12.4□□□□□ -0.42
LIMS2-206ENST00000409754 UBE2NLQ5JXB2 153 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 Q8N402 240 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 OR13C3Q8NGS6 347 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 LGALS14Q8TCE9 139 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 RNF122Q9H9V4 155 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 CRLF2Q9HC73 371 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 EMC3Q9P0I2 261 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 CKLFQ9UBR5 152 aa12.4□□□□□ -0.42
LIMS2-206ENST00000409754 TRGV5A0A0B4J1U4 118 aa12.39□□□□□ -0.43
LIMS2-206ENST00000409754 P2RY10O00398 339 aa12.39□□□□□ -0.43
LIMS2-206ENST00000409754 ATXN7O15265 892 aaPredicted RBP12.39□□□□□ -0.43
LIMS2-206ENST00000409754 NR4A2P43354 598 aa12.39□□□□□ -0.43
LIMS2-206ENST00000409754 PITPNBP48739 271 aa12.39□□□□□ -0.43
LIMS2-206ENST00000409754 SCAND1P57086 179 aa12.39□□□□□ -0.43
LIMS2-206ENST00000409754 ASAH1Q13510 395 aa12.39□□□□□ -0.43
LIMS2-206ENST00000409754 RNFT1Q5M7Z0 435 aa12.39□□□□□ -0.43
LIMS2-206ENST00000409754 ASPHD2Q6ICH7 369 aa12.39□□□□□ -0.43
LIMS2-206ENST00000409754 PYHIN1Q6K0P9 492 aa12.39□□□□□ -0.43
LIMS2-206ENST00000409754 BAIAP2L2Q6UXY1 529 aa12.39□□□□□ -0.43
LIMS2-206ENST00000409754 ZNF837Q96EG3 531 aaPredicted RBP12.39□□□□□ -0.43
LIMS2-206ENST00000409754 LDAHQ9H6V9 325 aa12.39□□□□□ -0.43
LIMS2-206ENST00000409754 LIN7BQ9HAP6 207 aa12.39□□□□□ -0.43
LIMS2-206ENST00000409754 ZNF71Q9NQZ8 489 aaPredicted RBP12.39□□□□□ -0.43
LIMS2-206ENST00000409754 TMEM38BQ9NVV0 291 aa12.39□□□□□ -0.43
LIMS2-206ENST00000409754 RABL2AQ9UBK7 228 aaPredicted RBP12.39□□□□□ -0.43
LIMS2-206ENST00000409754 RABL2BQ9UNT1 228 aa12.39□□□□□ -0.43
LIMS2-206ENST00000409754 NOSIPQ9Y314 301 aaKnown RBP12.39□□□□□ -0.43
LIMS2-206ENST00000409754 LIPGQ9Y5X9 500 aa12.39□□□□□ -0.43
LIMS2-206ENST00000409754 TRAV17A0A0B4J275 112 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 A0A0G2JMP0 313 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 A0A0X1KG70 313 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 ZNF724A8MTY0 619 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 PFDN1O60925 122 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 C1QL1O75973 258 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 CST2P09228 141 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 CPN1P15169 458 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 CX3CR1P49238 355 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 PRKXP51817 358 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 ZNF121P58317 390 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-206ENST00000409754 MADCAM1Q13477 382 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 STK11Q15831 433 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 CCDC92Q53HC0 331 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-206ENST00000409754 TRIQKQ629K1 86 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 GDPD3Q7L5L3 318 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 LRRC18Q8N456 261 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 OR4M2Q8NGB6 313 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 ALKBH3Q96Q83 286 aaPredicted RBP12.38□□□□□ -0.43
LIMS2-206ENST00000409754 LINC00470Q9BZP3 86 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 DEFB127Q9H1M4 99 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 GPR35Q9HC97 309 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 PARPBPQ9NWS1 579 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 STEAP1Q9UHE8 339 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 TUBD1Q9UJT1 453 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 ETV7Q9Y603 341 aa12.38□□□□□ -0.43
LIMS2-206ENST00000409754 PHF3Q92576 2039 aaKnown RBP12.38□□□□□ -0.43
LIMS2-206ENST00000409754 MEGF11A6BM72 1044 aa12.37□□□□□ -0.43
LIMS2-206ENST00000409754 OR6C65A6NJZ3 312 aa12.37□□□□□ -0.43
LIMS2-206ENST00000409754 SYT7O43581 403 aa12.37□□□□□ -0.43
LIMS2-206ENST00000409754 MRPL33O75394 65 aaKnown RBP12.37□□□□□ -0.43
LIMS2-206ENST00000409754 UBL3O95164 117 aa12.37□□□□□ -0.43
LIMS2-206ENST00000409754 PRB1P04280 392 aa12.37□□□□□ -0.43
LIMS2-206ENST00000409754 CD37P11049 281 aa12.37□□□□□ -0.43
LIMS2-206ENST00000409754 RNPS1Q15287 305 aaKnown RBP12.37□□□□□ -0.43
LIMS2-206ENST00000409754 ELFN2Q5R3F8 820 aa12.37□□□□□ -0.43
LIMS2-206ENST00000409754 LINGO2Q7L985 606 aa12.37□□□□□ -0.43
LIMS2-206ENST00000409754 CHMP1BQ7LBR1 199 aa12.37□□□□□ -0.43
LIMS2-206ENST00000409754 LUZP2Q86TE4 346 aa12.37□□□□□ -0.43
LIMS2-206ENST00000409754 ZNF283Q8N7M2 679 aa12.37□□□□□ -0.43
LIMS2-206ENST00000409754 RBMXL3Q8N7X1 1067 aaKnown RBP12.37□□□□□ -0.43
LIMS2-206ENST00000409754 DNAAF1Q8NEP3 725 aa12.37□□□□□ -0.43
LIMS2-206ENST00000409754 FNDC9Q8TBE3 224 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms