RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 RCC1LQ96I51 464 aaKnown RBP11.16□□□□□ -0.62
VCPKMT-201ENST00000395859 TECTBQ96PL2 329 aa11.16□□□□□ -0.62
VCPKMT-201ENST00000395859 GID8Q9NWU2 228 aa11.16□□□□□ -0.62
VCPKMT-201ENST00000395859 TMCC3Q9ULS5 477 aa11.16□□□□□ -0.62
VCPKMT-201ENST00000395859 CAB39Q9Y376 341 aaPredicted RBP11.16□□□□□ -0.62
VCPKMT-201ENST00000395859 KPTNQ9Y664 436 aa11.16□□□□□ -0.62
VCPKMT-201ENST00000395859 ALMS1Q8TCU4 4167 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 A0A1B0GVI7 797 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 LRRC30A6NM36 301 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 E9PQ18 207 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 SLC22A3O75751 556 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 CIB2O75838 187 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 SLC2A10O95528 541 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 IL6P05231 212 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 SRP9P49458 86 aaKnown RBP11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 ZNF74Q16587 644 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 BLOC1S3Q6QNY0 202 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 Q8N2B8 174 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 ATG16L2Q8NAA4 619 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 C19orf18Q8NEA5 215 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 AJUBAQ96IF1 538 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 WFDC6Q9BQY6 131 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 CADM1Q9BY67 442 aaKnown RBP11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 WNT10AQ9GZT5 417 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 KCNN2Q9H2S1 579 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 SMURF2Q9HAU4 748 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 ERVK-18Q9QC07 812 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 STARD10Q9Y365 291 aa11.15□□□□□ -0.62
VCPKMT-201ENST00000395859 RFXANKO14593 260 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 ANGPT2O15123 496 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 OR10H3O60404 316 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 TRMUO75648 421 aaKnown RBP11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 ABHD16AO95870 558 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 CST2P09228 141 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 ASAH2BP0C7U1 165 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 RAC2P15153 192 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 IL12AP29459 219 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 PRKAR1BP31321 381 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 RAD23AP54725 363 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 CDH12P55289 794 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 NME5P56597 212 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 CLRN1P58418 232 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 DSTNP60981 165 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 ELF3P78545 371 aaPredicted RBP11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 OR1Q1Q15612 314 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 AGKQ53H12 422 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 FOXL2NBQ6ZUU3 175 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 RNF144BQ7Z419 303 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 LY6G5BQ8NDX9 201 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 BEND2Q8NDZ0 799 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 OR8G5Q8NG78 346 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 ASB10Q8WXI3 467 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 TNFRSF14Q92956 283 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 PTP4A1Q93096 173 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 MAP6Q96JE9 813 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 PCDHAC1Q9H158 963 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 RMND5AQ9H871 391 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 ZNF702PQ9H963 129 aa11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 THUMPD1Q9NXG2 353 aaKnown RBP11.14□□□□□ -0.63
VCPKMT-201ENST00000395859 IGHV3-64DA0A0J9YX35 117 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 F5H5P2 479 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 H3BUX3 64 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 NPFFO15130 113 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 RNF13O43567 381 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 CHST1O43916 411 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 DUS4LO95620 317 aaKnown RBP11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 ZCCHC18P0CG32 403 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 COX5BP10606 129 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 HOXD3P31249 432 aaPredicted RBP11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 SLC35A2P78381 396 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 MAB21L1Q13394 359 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 DCTN2Q13561 401 aaKnown RBP11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 SWT1Q5T5J6 900 aaKnown RBP11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 PGM2L1Q6PCE3 622 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 BTN2A1Q7KYR7 527 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 ALDH16A1Q8IZ83 802 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 DPP10Q8N608 796 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 OR13G1Q8NGZ3 307 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 MUC13Q9H3R2 512 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 CACYBPQ9HB71 228 aaKnown RBP11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 CCDC167Q9P0B6 97 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 TIMM10BQ9Y5J6 103 aa11.13□□□□□ -0.63
VCPKMT-201ENST00000395859 TMEM247A6NEH6 219 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 TPST1O60507 370 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 ZFPL1O95159 310 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 OR6A2O95222 327 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 LYPD3O95274 346 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 ANP32DO95626 131 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 ECDO95905 644 aaPredicted RBP11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 NUDT7P0C024 238 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 ACADSP16219 412 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 HOXB6P17509 224 aaKnown RBP11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 LAP3P28838 519 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 NUDT2P50583 147 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 POLR2JP52435 117 aaKnown RBP11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 GUCA2AQ02747 115 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 FMODQ06828 376 aa11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 ENDOGQ14249 297 aaKnown RBP11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 SAMD4BQ5PRF9 694 aaKnown RBP11.12□□□□□ -0.63
VCPKMT-201ENST00000395859 ARMC4Q5T2S8 1044 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms