RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 LIX1LQ8IVB5 337 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 SLAMF6Q96DU3 332 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 TIGARQ9NQ88 270 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 PLEKHB1Q9UF11 243 aaPredicted RBP9.42□□□□□ -0.9
PDGFD-202ENST00000393158 GNG8Q9UK08 70 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 SLC22A13Q9Y226 551 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 NOSIPQ9Y314 301 aaKnown RBP9.42□□□□□ -0.9
PDGFD-202ENST00000393158 TTRP02766 147 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 MT-ND5P03915 603 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 DBHP09172 617 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 SPARCP09486 303 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 IL32P24001 234 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 PSG4Q00888 419 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 NDUFA5Q16718 116 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 ZNF529Q6P280 563 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 FAM214BQ7L5A3 538 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 BTLAQ7Z6A9 289 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 SLC7A6Q92536 515 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 TRIB1Q96RU8 372 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 ELOVL3Q9HB03 270 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 LOC100509620A0A075B734 347 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 TRBV5-7A0A0A0MS05 114 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 GLI4P10075 376 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 OPRM1P35372 400 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 RPL35P42766 123 aaKnown RBP9.42□□□□□ -0.9
PDGFD-202ENST00000393158 HAAOP46952 286 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 MMP16P51512 607 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 LY6DQ14210 128 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 RNF144BQ7Z419 303 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 CCDC28AQ8IWP9 274 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 SSC4DQ8WTU2 575 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 DMRTA2Q96SC8 542 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 FOXB1Q99853 325 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 SLC17A5Q9NRA2 495 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 LAMP5Q9UJQ1 280 aa9.42□□□□□ -0.9
PDGFD-202ENST00000393158 MCTS1Q9ULC4 181 aaKnown RBP9.42□□□□□ -0.9
PDGFD-202ENST00000393158 CELSR1Q9NYQ6 3014 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 ISG15P05161 165 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 ADRA2CP18825 462 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 MSR1P21757 451 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 CCKARP32238 428 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 DCTDP32321 178 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 ZNF474Q6S9Z5 364 aaPredicted RBP9.41□□□□□ -0.9
PDGFD-202ENST00000393158 CADM3Q8N126 398 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 LRRC18Q8N456 261 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 AKAP1Q92667 903 aaKnown RBP eCLIP9.41□□□□□ -0.9
PDGFD-202ENST00000393158 BCL2L2Q92843 193 aaPredicted RBP9.41□□□□□ -0.9
PDGFD-202ENST00000393158 MED30Q96HR3 178 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 TTYH2Q9BSA4 534 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 HDHD5Q9BXW7 423 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 TINAGQ9UJW2 476 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 TPRP12270 2363 aaKnown RBP9.41□□□□□ -0.9
PDGFD-202ENST00000393158 A0A1W2PPL8 197 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 TMEM8BA6NDV4 472 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 AIREO43918 545 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 SLC43A1O75387 559 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 ZNF254O75437 659 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 CST2P09228 141 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 CD53P19397 219 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 TIMP3P35625 211 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 BLVRAP53004 296 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 KRTCAP3Q53RY4 240 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 OR7E24Q6IFN5 339 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 RPL22L1Q6P5R6 122 aaKnown RBP9.41□□□□□ -0.9
PDGFD-202ENST00000393158 KLHL24Q6TFL4 600 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 C3P1Q6ZMU1 363 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 COLCA1Q6ZS62 124 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 PAQR4Q8N4S7 273 aaPredicted RBP9.41□□□□□ -0.9
PDGFD-202ENST00000393158 ZNF454Q8N9F8 522 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 ABHD4Q8TB40 342 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 TBC1D15Q8TC07 691 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 RBP7Q96R05 134 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 TMED9Q9BVK6 235 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 ULBP2Q9BZM5 246 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 SLC25A18Q9H1K4 315 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 DEGS2Q6QHC5 323 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 HDDC2Q7Z4H3 204 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.41□□□□□ -0.9
PDGFD-202ENST00000393158 CD163Q86VB7 1156 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 PLPP7Q8NBV4 271 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 THEM6Q8WUY1 208 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 CHCHD6Q9BRQ6 235 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 SEC61A2Q9H9S3 476 aa9.41□□□□□ -0.9
PDGFD-202ENST00000393158 ZNF726A6NNF4 738 aa9.4□□□□□ -0.9
PDGFD-202ENST00000393158 UCHL1P09936 223 aa9.4□□□□□ -0.9
PDGFD-202ENST00000393158 IGFBP3P17936 291 aaPredicted RBP9.4□□□□□ -0.9
PDGFD-202ENST00000393158 CCL1P22362 96 aa9.4□□□□□ -0.9
PDGFD-202ENST00000393158 ALKBH1Q13686 389 aaKnown RBP9.4□□□□□ -0.9
PDGFD-202ENST00000393158 SNAI3Q3KNW1 292 aa9.4□□□□□ -0.9
PDGFD-202ENST00000393158 SFRP5Q5T4F7 317 aa9.4□□□□□ -0.9
PDGFD-202ENST00000393158 FBXW9Q5XUX1 488 aa9.4□□□□□ -0.9
PDGFD-202ENST00000393158 C22orf42Q6IC83 251 aa9.4□□□□□ -0.9
PDGFD-202ENST00000393158 SPATC1Q76KD6 591 aa9.4□□□□□ -0.9
PDGFD-202ENST00000393158 WDR31Q8NA23 367 aa9.4□□□□□ -0.9
PDGFD-202ENST00000393158 ASB17Q8WXJ9 295 aa9.4□□□□□ -0.9
PDGFD-202ENST00000393158 SARAFQ96BY9 339 aa9.4□□□□□ -0.9
PDGFD-202ENST00000393158 ZHX1-C8orf76Q96EF9 292 aa9.4□□□□□ -0.9
PDGFD-202ENST00000393158 C12orf49Q9H741 205 aa9.4□□□□□ -0.9
PDGFD-202ENST00000393158 B3GAT2Q9NPZ5 323 aa9.4□□□□□ -0.9
PDGFD-202ENST00000393158 CRIM1Q9NZV1 1036 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms