RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 MYBPHQ13203 477 aa9.67□□□□□ -0.86
NEDD9-201ENST00000379433 EIF2B1Q14232 305 aaKnown RBP9.67□□□□□ -0.86
NEDD9-201ENST00000379433 TMEM200AQ86VY9 491 aa9.67□□□□□ -0.86
NEDD9-201ENST00000379433 TMPRSS12Q86WS5 348 aa9.67□□□□□ -0.86
NEDD9-201ENST00000379433 OR5AK2Q8NH90 309 aa9.67□□□□□ -0.86
NEDD9-201ENST00000379433 TMEM106AQ96A25 262 aa9.67□□□□□ -0.86
NEDD9-201ENST00000379433 MARVELD3Q96A59 401 aa9.67□□□□□ -0.86
NEDD9-201ENST00000379433 SMIM19Q96E16 107 aa9.67□□□□□ -0.86
NEDD9-201ENST00000379433 CHRNA10Q9GZZ6 450 aa9.67□□□□□ -0.86
NEDD9-201ENST00000379433 WASF3Q9UPY6 502 aa9.67□□□□□ -0.86
NEDD9-201ENST00000379433 IQCMA0A1B0GVH7 501 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 FAM240BA0A1B0GVZ2 78 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 MEIS3P1A6NDR6 274 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 SMLR1H3BR10 107 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 ARPC3O15145 178 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 PLPP2O43688 288 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 EFNA2O43921 213 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 GPRIN2O60269 458 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 EIF4E2O60573 245 aaKnown RBP9.66□□□□□ -0.86
NEDD9-201ENST00000379433 PRSS12P56730 875 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 RPL27P61353 136 aaKnown RBP9.66□□□□□ -0.86
NEDD9-201ENST00000379433 ACTA2P62736 377 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 ACTG2P63267 376 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 INSM1Q01101 510 aaPredicted RBP9.66□□□□□ -0.86
NEDD9-201ENST00000379433 POU4F2Q12837 409 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 POMGNT2Q8NAT1 580 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 C22orf15Q8WYQ4 148 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 NKD1Q969G9 470 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 RRNAD1Q96FB5 475 aaKnown RBP9.66□□□□□ -0.86
NEDD9-201ENST00000379433 TCF7L1Q9HCS4 588 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 ING3Q9NXR8 418 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 ST6GALNAC2Q9UJ37 374 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 ZNF221Q9UK13 617 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 LOXL2Q9Y4K0 774 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 PRSS37A4D1T9 235 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 UBE2CO00762 179 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 UMODP07911 640 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 CASP3P42574 277 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 CDKN1BP46527 198 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 PRKXP51817 358 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 USF2Q15853 346 aaPredicted RBP9.66□□□□□ -0.86
NEDD9-201ENST00000379433 ZFP69Q49AA0 526 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 SMIM15Q7Z3B0 74 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 YRDCQ86U90 279 aaKnown RBP9.66□□□□□ -0.86
NEDD9-201ENST00000379433 LGALS14Q8TCE9 139 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 CD300LFQ8TDQ1 290 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 NINJ1Q92982 152 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 FRRS1LQ9P0K9 344 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 PPIEQ9UNP9 301 aaKnown RBP9.66□□□□□ -0.86
NEDD9-201ENST00000379433 HS3ST3B1Q9Y662 390 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 ERCC1P07992 297 aaPredicted RBP9.66□□□□□ -0.86
NEDD9-201ENST00000379433 ZNF250P15622 560 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 ZNF823P16415 610 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 FOLR3P41439 243 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 DUSP3P51452 185 aaPredicted RBP9.66□□□□□ -0.86
NEDD9-201ENST00000379433 DMKNQ6E0U4 476 aaPredicted RBP9.66□□□□□ -0.86
NEDD9-201ENST00000379433 ZNF517Q6ZMY9 492 aaPredicted RBP9.66□□□□□ -0.86
NEDD9-201ENST00000379433 EMC7Q9NPA0 242 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 B9D1Q9UPM9 204 aa9.66□□□□□ -0.86
NEDD9-201ENST00000379433 LEUTXA8MZ59 168 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 ZNF814B7Z6K7 855 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 PLPP3O14495 311 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 SRMP19623 302 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 PPP3R1P63098 170 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 SPEM2Q0P670 501 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 CD200R1LQ6Q8B3 271 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 FCRLAQ7L513 359 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 LINGO2Q7L985 606 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 ZNF441Q8N8Z8 693 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 EXOSC3Q9NQT5 275 aaKnown RBP9.65□□□□□ -0.86
NEDD9-201ENST00000379433 EMC9Q9Y3B6 208 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 WIF1Q9Y5W5 379 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 DOCK10Q96BY6 2186 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 ICE1Q9Y2F5 2266 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 DCDC2BA2VCK2 349 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 SRYQ05066 204 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 MFAP5Q13361 173 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 ZSWIM7Q19AV6 140 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 FREM1Q5H8C1 2179 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 FAAP20Q6NZ36 180 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 SHISA2Q6UWI4 295 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.65□□□□□ -0.86
NEDD9-201ENST00000379433 OR2C3Q8N628 320 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 OR11G2Q8NGC1 345 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 ZCCHC14Q8WYQ9 949 aaKnown RBP9.65□□□□□ -0.86
NEDD9-201ENST00000379433 ABHD1Q96SE0 405 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 UNKLQ9H9P5 680 aaKnown RBP9.65□□□□□ -0.86
NEDD9-201ENST00000379433 ZMAT3Q9HA38 289 aaKnown RBP9.65□□□□□ -0.86
NEDD9-201ENST00000379433 SEPSECSQ9HD40 501 aaKnown RBP9.65□□□□□ -0.86
NEDD9-201ENST00000379433 PADI1Q9ULC6 663 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 CAMK2AQ9UQM7 478 aa9.65□□□□□ -0.86
NEDD9-201ENST00000379433 NBEAQ8NFP9 2946 aa9.64□□□□□ -0.87
NEDD9-201ENST00000379433 TRAV34A0A0B4J273 112 aa9.64□□□□□ -0.87
NEDD9-201ENST00000379433 ANXA2P2A6NMY6 339 aa9.64□□□□□ -0.87
NEDD9-201ENST00000379433 SULT2B1O00204 365 aa9.64□□□□□ -0.87
NEDD9-201ENST00000379433 FZD7O75084 574 aa9.64□□□□□ -0.87
NEDD9-201ENST00000379433 KLF7O75840 302 aaPredicted RBP9.64□□□□□ -0.87
NEDD9-201ENST00000379433 ANXA2P07355 339 aaKnown RBP9.64□□□□□ -0.87
NEDD9-201ENST00000379433 HOXD4P09016 255 aaPredicted RBP9.64□□□□□ -0.87
NEDD9-201ENST00000379433 RFX2P48378 723 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms