RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 DTWD2Q8NBA8 298 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 CPEB3Q8NE35 698 aaKnown RBP13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 H3BMH7 237 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 RBP2P50120 134 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 DGCR2P98153 550 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 TMUB2Q71RG4 321 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 MOB3BQ86TA1 216 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 ISG20L2Q9H9L3 353 aaKnown RBP13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 SH2D1BO14796 132 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 SLC19A1P41440 591 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 TMEM65Q6PI78 240 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 SPRED1Q7Z699 444 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 NANPQ8TBE9 248 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 ASCC3Q8N3C0 2202 aaKnown RBP13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 RGS11O94810 467 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 CPEP16870 476 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 FPR3P25089 353 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 ASCL1P50553 236 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 TAGLNQ01995 201 aaKnown RBP13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 TAF9Q16594 264 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 SSX7Q7RTT5 188 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 OR4F5Q8NH21 305 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 NUDCD2Q8WVJ2 157 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 OR4F4Q96R69 305 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 NTN4Q9HB63 628 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 MED17Q9NVC6 651 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 CRYBG1Q9Y4K1 1723 aa13.38□□□□□ -0.27
NOTCH4-201ENST00000375023 GPM6AP51674 278 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 AGERQ15109 404 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 ELAVL1Q15717 326 aaKnown RBP13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 PHYHD1Q5SRE7 291 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 C1QTNF3Q9BXJ4 246 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 LAMB4A4D0S4 1761 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 CTSLP07711 333 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 CCR2P41597 374 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 RPL18Q07020 188 aaKnown RBP13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 MRPS24Q96EL2 167 aaKnown RBP13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 C14orf79Q96F83 325 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 ARL2-SNX15V9GYD0 113 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 DCTN6O00399 190 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 DTYMKP23919 212 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 LPCAT3Q6P1A2 487 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 C16orf52Q8NHV5 167 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 ATF6BQ99941 703 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 ZPBPQ9BS86 351 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 TMEM43Q9BTV4 400 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 AK3Q9UIJ7 227 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 ARNTP27540 789 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 APOBEC1P41238 236 aaKnown RBP13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 FAM109AQ8N4B1 249 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 NIPSNAP3BQ9BS92 247 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 SIAEQ9HAT2 523 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 FBXO8Q9NRD0 319 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 OR7C2O60412 319 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 NRASP01111 189 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 SBK2P0C263 348 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 ZNF133P52736 654 aaPredicted RBP13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 PRSS12P56730 875 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 SNRPNP63162 240 aaKnown RBP13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 CD300LGQ6UXG3 332 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 DPF1Q92782 380 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 SLC35E1Q96K37 410 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 FLVCR1Q9Y5Y0 555 aa13.37□□□□□ -0.27
NOTCH4-201ENST00000375023 DEFB108AA8MXU0 73 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 ZGLP1P0C6A0 271 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 NKX2-1P43699 371 aaPredicted RBP13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 SYT14P1Q58G82 188 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 GAL3ST2Q9H3Q3 398 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 SLC17A4Q9Y2C5 497 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 M0R135 149 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 FAM109BQ6ICB4 259 aaPredicted RBP13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 CA13Q8N1Q1 262 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 C11orf42Q8N5U0 333 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 OR1M1Q8NGA1 313 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 OR11G2Q8NGC1 345 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 ZNF799Q96GE5 643 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 ALKBH3Q96Q83 286 aaPredicted RBP13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 PLEKHB1Q9UF11 243 aaPredicted RBP13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 DNASE2O00115 360 aaPredicted RBP13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 S100A7P31151 101 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 PMP22Q01453 160 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 OR5I1Q13606 314 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 SPINK9Q5DT21 86 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 SAXO2Q658L1 398 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 TCTN3Q6NUS6 607 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 UBTD2Q8WUN7 234 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 RPUSD4Q96CM3 377 aaKnown RBP13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 DDOQ99489 341 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 MMP17Q9ULZ9 603 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 ZNF835Q9Y2P0 537 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 CORINQ9Y5Q5 1042 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 UBL3O95164 117 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 OPN1MWP04001 364 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 OPN1MW2P0DN77 364 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 OPN1MW3P0DN78 364 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 TMEM268Q5VZI3 342 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 NLRC3Q7RTR2 1065 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 RNF141Q8WVD5 230 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 K7EQM0 130 aa13.36□□□□□ -0.27
NOTCH4-201ENST00000375023 SLC25A6P12236 298 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms