RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 FAM221AA4D161 298 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 TRIM64A6NGJ6 449 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 SHISA9B4DS77 424 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 CDK1P06493 297 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 CD3EP07766 207 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 ACSM4P0C7M7 580 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 FAM157BP0CG42 384 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 LIMS3P0CW19 117 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 LIMS4P0CW20 117 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 SMIM18P0DKX4 95 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 ETV1P50549 477 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 GALEQ14376 348 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 TP53I3Q53FA7 332 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 DEGS2Q6QHC5 323 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.84□□□□□ -0.35
CCNE1-202ENST00000357943 KBTBD8Q8NFY9 601 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 SPTSSAQ969W0 71 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 C4orf45Q96LM5 186 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 KCNS3Q9BQ31 491 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 TMEM204Q9BSN7 226 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 INPP5EQ9NRR6 644 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 RNF115Q9Y4L5 304 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 LRBAP50851 2863 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 FBN2P35556 2912 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 ABHD16AO95870 558 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 NGFP01138 241 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 SLC2A1P11166 492 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 SLC6A9P48067 706 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 RIDAP52758 137 aaKnown RBP12.84□□□□□ -0.35
CCNE1-202ENST00000357943 TPTEP56180 551 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 OR12D2P58182 307 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 CDONQ4KMG0 1287 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 ZNF283Q8N7M2 679 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 IPCEF1Q8WWN9 437 aaPredicted RBP12.84□□□□□ -0.35
CCNE1-202ENST00000357943 NEUROG1Q92886 237 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 ISG20L2Q9H9L3 353 aaKnown RBP12.84□□□□□ -0.35
CCNE1-202ENST00000357943 ACOXLQ9NUZ1 547 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 ERVK-18Q9QC07 812 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 GNG8Q9UK08 70 aa12.84□□□□□ -0.35
CCNE1-202ENST00000357943 ABCA4P78363 2273 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 PTPN13Q12923 2485 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 METTL15A6NJ78 407 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 J3QLW9 94 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 SMPD2O60906 423 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 ZNF254O75437 659 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 CTAG2O75638 210 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 SULT1C4O75897 302 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 KRT8P05787 483 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 ZNF19P17023 458 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 MYL12AP19105 171 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 CX3CR1P49238 355 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 UCP2P55851 309 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 OR2G6Q5TZ20 316 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 LIPNQ5VXI9 398 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 ZNF295-AS1Q8N0V1 137 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 YIPF7Q8N8F6 280 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 LILRB1Q8NHL6 650 aaPredicted RBP12.83□□□□□ -0.36
CCNE1-202ENST00000357943 MYDGFQ969H8 173 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 C4orf36Q96KX1 117 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 SIGLEC11Q96RL6 698 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 DOK1Q99704 481 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 BRD7Q9NPI1 651 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 POU2F3Q9UKI9 436 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 BLOC1S6Q9UL45 172 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 EXOSC1Q9Y3B2 195 aaKnown RBP12.83□□□□□ -0.36
CCNE1-202ENST00000357943 N6AMT1Q9Y5N5 214 aa12.83□□□□□ -0.36
CCNE1-202ENST00000357943 C5orf63A6NC05 138 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 GPRIN2O60269 458 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 ICMTO60725 284 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 RPP14O95059 124 aaKnown RBP12.82□□□□□ -0.36
CCNE1-202ENST00000357943 HTR1AP08908 422 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 NR4A1P22736 598 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 EEF1B2P24534 225 aaKnown RBP12.82□□□□□ -0.36
CCNE1-202ENST00000357943 PCSK6P29122 969 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 ZNF121P58317 390 aaPredicted RBP12.82□□□□□ -0.36
CCNE1-202ENST00000357943 ERVS71-1P61550 626 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 ACTA2P62736 377 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 ACTG2P63267 376 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 NKX6-1P78426 367 aaPredicted RBP12.82□□□□□ -0.36
CCNE1-202ENST00000357943 SNTB2Q13425 540 aaKnown RBP12.82□□□□□ -0.36
CCNE1-202ENST00000357943 SNAI3Q3KNW1 292 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 DRAM2Q6UX65 266 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 ZNF704Q6ZNC4 412 aaPredicted RBP12.82□□□□□ -0.36
CCNE1-202ENST00000357943 COLCA1Q6ZS62 124 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 RFPL4BQ6ZWI9 263 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 PRSS45Q7RTY3 260 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 TSPAN14Q8NG11 270 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 ABHD4Q8TB40 342 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 DCLRE1CQ96SD1 692 aaKnown RBP12.82□□□□□ -0.36
CCNE1-202ENST00000357943 C1QTNF5Q9BXJ0 243 aa12.82□□□□□ -0.36
CCNE1-202ENST00000357943 MRPS26Q9BYN8 205 aaKnown RBP12.82□□□□□ -0.36
CCNE1-202ENST00000357943 CHCHD3Q9NX63 227 aaKnown RBP12.82□□□□□ -0.36
CCNE1-202ENST00000357943 EIF3KQ9UBQ5 218 aaKnown RBP12.82□□□□□ -0.36
CCNE1-202ENST00000357943 HEATR1Q9H583 2144 aaKnown RBP12.81□□□□□ -0.36
CCNE1-202ENST00000357943 TMEM269A0A1B0GVZ9 245 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 RGS10O43665 173 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 SRSF10O75494 262 aaKnown RBP12.81□□□□□ -0.36
CCNE1-202ENST00000357943 PNPP00491 289 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 LCATP04180 440 aa12.81□□□□□ -0.36
CCNE1-202ENST00000357943 ANXA2P07355 339 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms