RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 KLHL36Q8N4N3 616 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 BHLHE23Q8NDY6 225 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 OR52E2Q8NGJ4 325 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 APOBEC3DQ96AK3 386 aaPredicted RBP10.48□□□□□ -0.73
SGCA-202ENST00000344627 OR2V2Q96R30 315 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 COQ7Q99807 217 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 HDHD2Q9H0R4 259 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 WDR76Q9H967 626 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 IL1RAPQ9NPH3 570 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 LHFPL6Q9Y693 200 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 DOCK11Q5JSL3 2073 aa10.48□□□□□ -0.73
SGCA-202ENST00000344627 IGLV1-36A0A0B4J1U3 117 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 IGHV3-64DA0A0J9YX35 117 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 TNFRSF11BO00300 401 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 IDH3BO43837 385 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 AVPP01185 164 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 FSHBP01225 129 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 SEMG1P04279 462 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 ZNF823P16415 610 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 MNAT1P51948 309 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 TSPAN31Q12999 210 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 SLC27A4Q6P1M0 643 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 C1orf229Q6ZS94 237 aaPredicted RBP10.47□□□□□ -0.73
SGCA-202ENST00000344627 OR10AD1Q8NGE0 317 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 OR52L1Q8NGH7 329 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 OR13G1Q8NGZ3 307 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 ZNF582Q96NG8 517 aaPredicted RBP10.47□□□□□ -0.73
SGCA-202ENST00000344627 ZNF747Q9BV97 191 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 HCAR1Q9BXC0 346 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 ZNF696Q9H7X3 374 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 IL19Q9UHD0 177 aa10.47□□□□□ -0.73
SGCA-202ENST00000344627 OR6C68A6NDL8 312 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 B2RBV5 119 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 ARPC3O15145 178 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 KRT36O76013 467 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 FSTL3O95633 263 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 IGHV2-70P01814 119 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 LCATP04180 440 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 PPIAL4GP0DN37 164 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 HKR1P10072 659 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 PYCR1P32322 319 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 GSSP48637 474 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 BTG1P62324 171 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.46□□□□□ -0.73
SGCA-202ENST00000344627 COX10Q12887 443 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 MALLQ13021 153 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 PRR31Q5SQ13 230 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 PGBD2Q6P3X8 592 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 ZNF620Q6ZNG0 422 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 CFAP77Q6ZQR2 320 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 PIGWQ7Z7B1 504 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 ZNF283Q8N7M2 679 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 CYB561A3Q8NBI2 242 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 PROKR2Q8NFJ6 384 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 SLC26A10Q8NG04 563 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 OR8G5Q8NG78 346 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 OR9Q2Q8NGE9 314 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 ZNF420Q8TAQ5 688 aaPredicted RBP10.46□□□□□ -0.73
SGCA-202ENST00000344627 EGLN3Q9H6Z9 239 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 TMEM100Q9NV29 134 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 ATPIF1Q9UII2 106 aa10.46□□□□□ -0.73
SGCA-202ENST00000344627 POM121CA8CG34 1229 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 H0YL77 283 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 CLDN34H7C241 214 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 CCNB2O95067 398 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 ZNF205O95201 554 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 SELEP16581 610 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 EGR1P18146 543 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 ZFP36P26651 326 aaKnown RBP10.45□□□□□ -0.74
SGCA-202ENST00000344627 SRP9P49458 86 aaKnown RBP10.45□□□□□ -0.74
SGCA-202ENST00000344627 TPTEP56180 551 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 PRSS12P56730 875 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 UBA52P62987 128 aaKnown RBP10.45□□□□□ -0.74
SGCA-202ENST00000344627 HIST1H3AP68431 136 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 ECH1Q13011 328 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 TUSC1Q2TAM9 212 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 SPATS1Q496A3 300 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 AWAT1Q58HT5 328 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 HIST2H3PS2Q5TEC6 136 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 SLC18B1Q6NT16 456 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 FBXW12Q6X9E4 464 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 HIST2H3AQ71DI3 136 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 DOK3Q7L591 496 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 LRRC28Q86X40 367 aaPredicted RBP10.45□□□□□ -0.74
SGCA-202ENST00000344627 MUC20Q8N307 709 aaPredicted RBP10.45□□□□□ -0.74
SGCA-202ENST00000344627 C22orf15Q8WYQ4 148 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 NSL1Q96IY1 281 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 MEGF10Q96KG7 1140 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 ATF6BQ99941 703 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 MRI1Q9BV20 369 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 GCM1Q9NP62 436 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 TBC1D23Q9NUY8 699 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 ACTR3BQ9P1U1 418 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 NUP50Q9UKX7 468 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 N6AMT1Q9Y5N5 214 aa10.45□□□□□ -0.74
SGCA-202ENST00000344627 TVP23AA6NH52 213 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 A8MXK9 166 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 F5H5P2 479 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 TMEM178BH3BS89 294 aa10.44□□□□□ -0.74
SGCA-202ENST00000344627 CYB5R3P00387 301 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms