RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 AADACP22760 399 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 DUSP1P28562 367 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF85Q03923 595 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 HNRNPA0Q13151 305 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 KHDC1Q4VXA5 237 aaKnown RBP3.01□□□□□ -1.93
CSMD3-202ENST00000339701 DBX2Q6ZNG2 339 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 FAM26EQ8N5C1 309 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 GRAMD2BQ96HH9 432 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 RBKSQ9H477 322 aa3.01□□□□□ -1.93
CSMD3-202ENST00000339701 TRAV9-1A0A075B6T8 112 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 A0A1B0GW15 77 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 F5H5K5 113 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 TYROBPO43914 113 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 HRASP01112 189 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 CD3EP07766 207 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 TNFSF10P50591 281 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 CAV2P51636 162 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 TPPP2P59282 170 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 TSPAN31Q12999 210 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 HABP2Q14520 560 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 ISXQ2M1V0 245 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 MPV17LQ2QL34 196 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 MS4A13Q5J8X5 152 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 SIGIRRQ6IA17 410 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 JMJD6Q6NYC1 403 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 VWA1Q6PCB0 445 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ADGRE4PQ86SQ3 457 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 RTN4IP1Q8WWV3 396 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 ARHGDIGQ99819 225 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 SMOQ99835 787 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 CTRCQ99895 268 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 NIPSNAP1Q9BPW8 284 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 MRPL45Q9BRJ2 306 aaKnown RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM59Q9BXS4 323 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 RAB6CQ9H0N0 254 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ARV1Q9H2C2 271 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 DTLQ9NZJ0 730 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 WRAP73Q9P2S5 460 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 RAXQ9Y2V3 346 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ABLIM3O94929 683 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 CSF2P04141 144 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 TMEM225BP0DP42 221 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 MMP9P14780 707 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 MPSTP25325 297 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 HOXD11P31277 338 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 SLC35A1P78382 337 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 AMMECR1LQ6DCA0 310 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 LINC00596Q86U02 117 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 BMPERQ8N8U9 685 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 RAB1CQ92928 201 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 PGAM5Q96HS1 289 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 CPPED1Q9BRF8 314 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF442Q9H7R0 627 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 FBXL17Q9UF56 701 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 OR1A2Q9Y585 309 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 NPEPPSL1A6NEC2 478 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 LINC00587B1AMM8 73 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 H3BML4 177 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 XRCC2O43543 280 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 TPST2O60704 377 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 PLATP00750 562 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 PCSK6P29122 969 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 FGF9P31371 208 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 RAB38P57729 211 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 SLC35B1P78383 322 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 S100A7L2Q5SY68 101 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF429Q86V71 674 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 TP53I13Q8NBR0 393 aaPredicted RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 ZNF439Q8NDP4 499 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 OR13F1Q8NGS4 319 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 LKAAEAR1Q8TD35 194 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 SSC4DQ8WTU2 575 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ST8SIA1Q92185 356 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 YIPF5Q969M3 257 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 OR7D2Q96RA2 312 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 SDF2Q99470 211 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 GPR21Q99679 349 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 SOX7Q9BT81 388 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 DDX31Q9H8H2 851 aaKnown RBP3□□□□□ -1.93
CSMD3-202ENST00000339701 OCIAD1Q9NX40 245 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 VDAC3Q9Y277 283 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 PKIGQ9Y2B9 76 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 U3KQV3 271 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 OR6C76A6NM76 312 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 FZD6O60353 706 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 SMIM17P0DL12 118 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 KLK7P49862 253 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 CSRP3P50461 194 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 ATP5J2P56134 94 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 NAAAQ02083 359 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 TBC1D28Q2M2D7 210 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 Q5PR19 223 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 HTR3DQ70Z44 454 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 SPICQ8N5J4 248 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 STPG3Q8N7X2 389 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 OR4D9Q8NGE8 314 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 OR10K1Q8NGX5 313 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 FRZBQ92765 325 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 PTX4Q96A99 478 aa3□□□□□ -1.93
CSMD3-202ENST00000339701 SPSB1Q96BD6 273 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms