RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 UBE2IP63279 158 aaKnown RBP12.47□□□□□ -0.41
RTN4-202ENST00000337526 BAXQ07812 192 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 TAF9Q16594 264 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 PELI1Q96FA3 418 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 PLEKHF2Q9H8W4 249 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 C20orf141Q9NUB4 165 aa12.47□□□□□ -0.41
RTN4-202ENST00000337526 FER1L6Q2WGJ9 1857 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 SERTM1A2A2V5 107 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 C17orf112F2Z3M2 114 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 H2AFB1P0C5Y9 115 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 GNB3P16520 340 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 EMG1Q92979 244 aaKnown RBP12.46□□□□□ -0.41
RTN4-202ENST00000337526 PLEKHB1Q9UF11 243 aaPredicted RBP12.46□□□□□ -0.41
RTN4-202ENST00000337526 ZFP92A6NM28 416 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 SLC17A2O00624 439 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 PPP1R2P9O14990 202 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 OLFM2O95897 454 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 PCBP3P57721 371 aaKnown RBP12.46□□□□□ -0.41
RTN4-202ENST00000337526 FAM74A1Q5RGS3 127 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 MAMSTRQ6ZN01 415 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 OR1S2Q8NGQ3 325 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 OR4C3Q8NH37 302 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 OR51F2Q8NH61 342 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 NT5CQ8TCD5 201 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 APH1BQ8WW43 257 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 KCNJ15Q99712 375 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 SPTA1P02549 2419 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 ARAP2Q8WZ64 1704 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 RREB1Q92766 1687 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 HSBP1L1C9JCN9 74 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 PYCARD-AS1I3L0S3 204 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 TIMM8AO60220 97 aaPredicted RBP12.46□□□□□ -0.41
RTN4-202ENST00000337526 TBPP20226 339 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 MAGEB1P43366 347 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 NDUFA6P56556 154 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 PCBP4P57723 403 aaKnown RBP12.46□□□□□ -0.41
RTN4-202ENST00000337526 PAN3Q58A45 887 aaKnown RBP12.46□□□□□ -0.41
RTN4-202ENST00000337526 SYT13Q7L8C5 426 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 DND1Q8IYX4 353 aaKnown RBP12.46□□□□□ -0.41
RTN4-202ENST00000337526 C8orf44Q96CB5 159 aa12.46□□□□□ -0.41
RTN4-202ENST00000337526 PLPP2O43688 288 aa12.46□□□□□ -0.42
RTN4-202ENST00000337526 CD160O95971 181 aa12.46□□□□□ -0.42
RTN4-202ENST00000337526 MGMTP16455 207 aa12.46□□□□□ -0.42
RTN4-202ENST00000337526 DUSP1P28562 367 aa12.46□□□□□ -0.42
RTN4-202ENST00000337526 FCGR2CP31995 323 aa12.46□□□□□ -0.42
RTN4-202ENST00000337526 VHLLQ6RSH7 139 aa12.46□□□□□ -0.42
RTN4-202ENST00000337526 MORN4Q8NDC4 146 aa12.46□□□□□ -0.42
RTN4-202ENST00000337526 WDR34Q96EX3 536 aa12.46□□□□□ -0.42
RTN4-202ENST00000337526 ARV1Q9H2C2 271 aa12.46□□□□□ -0.42
RTN4-202ENST00000337526 PLK3Q9H4B4 646 aa12.46□□□□□ -0.42
RTN4-202ENST00000337526 TMEM231Q9H6L2 316 aa12.46□□□□□ -0.42
RTN4-202ENST00000337526 SPACA1Q9HBV2 294 aa12.46□□□□□ -0.42
RTN4-202ENST00000337526 YRDCQ86U90 279 aaKnown RBP12.45□□□□□ -0.42
RTN4-202ENST00000337526 GALNT16Q8N428 558 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 LINC01555Q8NAE3 123 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 OR1J2Q8NGS2 313 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 HLA-CQ95604 372 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 RAB39BQ96DA2 213 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 BARHL1Q9BZE3 327 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 PBOV1Q9GZY1 135 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 HEYLQ9NQ87 328 aaPredicted RBP12.45□□□□□ -0.42
RTN4-202ENST00000337526 WBP1LQ9NX94 342 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 DUSP13Q9UII6 198 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 TRIP11Q15643 1979 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 A0A0B4J2E0 115 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 A0A1B0GX12 115 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 NUDT19A8MXV4 375 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 PTHLHP12272 177 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 GALP22466 123 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 BAMBIQ13145 260 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 C8orf82Q6P1X6 216 aaPredicted RBP12.45□□□□□ -0.42
RTN4-202ENST00000337526 PLXDC2Q6UX71 529 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 UBL7Q96S82 380 aaPredicted RBP12.45□□□□□ -0.42
RTN4-202ENST00000337526 GPR160Q9UJ42 338 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 SLCO1B1Q9Y6L6 691 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 A0A1W2PPC4 97 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 OR6C76A6NM76 312 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 ZNF724A8MTY0 619 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 H7C1Q1 480 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 HSD17B6O14756 317 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 NME2P1O60361 137 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 CCR5P51681 352 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 GUCA2AQ02747 115 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 SHHQ15465 462 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 TRIM61Q5EBN2 209 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 TFAP2EQ6VUC0 442 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 EXD3Q8N9H8 876 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 ST8SIA2Q92186 375 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 UHRF2Q96PU4 802 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 PBX4Q9BYU1 374 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 PATZ1Q9HBE1 687 aaKnown RBP12.45□□□□□ -0.42
RTN4-202ENST00000337526 LGALS8O00214 317 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 NKX2-2O95096 273 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 ZFPL1O95159 310 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 TBXA2RP21731 343 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 RPL12P30050 165 aaKnown RBP12.45□□□□□ -0.42
RTN4-202ENST00000337526 RAB11AP62491 216 aa12.45□□□□□ -0.42
RTN4-202ENST00000337526 TIAL1Q01085 375 aaKnown RBP eCLIP12.45□□□□□ -0.42
RTN4-202ENST00000337526 KIAA0141Q14154 515 aaPredicted RBP12.45□□□□□ -0.42
RTN4-202ENST00000337526 ADIRFQ15847 76 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms